DQ267102 Gene Detail

Summary

• Symbol
  DQ267102
• Name
  snoRNA DQ267102
• Synonyms
  Im snoRNA 3

• Feature Type
  snoRNA gene
• IDs
  MGI:5439880
  NCBI Gene: 100861572
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:109622779-109622849 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic

Strain
Comparison

• SNPs within 2kb
  42 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5439880	snoRNA gene	Chr12:109622779-109622850 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038670	snoRNA gene	Chr12:111890392-111890463 (+)
A/J	MGP_AJ_G0038662	snoRNA gene	Chr12:107580027-107580098 (+)
AKR/J	MGP_AKRJ_G0038597	snoRNA gene	Chr12:110716319-110716390 (+)
BALB/cJ	MGP_BALBcJ_G0038647	snoRNA gene	Chr12:108052717-108052788 (+)
C3H/HeJ	MGP_C3HHeJ_G0038309	snoRNA gene	Chr12:111162239-111162310 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039192	snoRNA gene	Chr12:115306891-115306962 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035949	snoRNA gene	Chr12:104103158-104103230 (+)
CAST/EiJ	MGP_CASTEiJ_G0037450	snoRNA gene	Chr12:106119668-106119739 (+)
CBA/J	MGP_CBAJ_G0038281	snoRNA gene	Chr12:119845991-119846062 (+)
DBA/2J	MGP_DBA2J_G0038470	snoRNA gene	Chr12:107136972-107137043 (+)
FVB/NJ	MGP_FVBNJ_G0038423	snoRNA gene	Chr12:105927077-105927148 (+)
LP/J	MGP_LPJ_G0038509	snoRNA gene	Chr12:111720516-111720587 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038421	snoRNA gene	Chr12:123003705-123003776 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039295	snoRNA gene	Chr12:110201183-110201254 (+)
PWK/PhJ	MGP_PWKPhJ_G0037136	snoRNA gene	Chr12:101743576-101743647 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036893	snoRNA gene	Chr12:104367441-104367512 (+)
WSB/EiJ	MGP_WSBEiJ_G0037683	snoRNA gene	Chr12:111113643-111113714 (+)

Homology

• Gene Tree
  DQ267102
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000064417 (Evidence)
• NCBI Gene
  100861572

Representative Sequences			Length	Strain/Species
genomic	100861572	NCBI Gene Model | MGI Sequence Detail	71	C57BL/6J
transcript	NR_046306	RefSeq | MGI Sequence Detail	71	Kunming

References

• Summaries
  All 4
• Earliest
  J:104984 Xiao Y, et al., Characterization of three novel imprinted snoRNAs from mouse Irm gene. Biochem Biophys Res Commun. 2006 Feb 24;340(4):1217-23