Gm22078 Gene Detail

Summary

• Symbol
  Gm22078
• Name
  predicted gene, 22078

• Feature Type
  snRNA gene
• IDs
  MGI:5451855
  NCBI Gene: 115489796
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:146093497-146093599 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  182 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5451855	snRNA gene	Chr3:146093497-146093599 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037866	snRNA gene	Chr3:149895050-149895152 (-)
A/J	MGP_AJ_G0037851	snRNA gene	Chr3:144514539-144514641 (-)
AKR/J	MGP_AKRJ_G0037792	snRNA gene	Chr3:148378285-148378387 (-)
BALB/cJ	MGP_BALBcJ_G0037837	snRNA gene	Chr3:144342820-144342922 (-)
C3H/HeJ	MGP_C3HHeJ_G0037510	snRNA gene	Chr3:148738599-148738701 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038366	snRNA gene	Chr3:154920263-154920365 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035257	snRNA gene	Chr3:139582286-139582388 (-)
CAST/EiJ	MGP_CASTEiJ_G0036673	snRNA gene	Chr3:148716432-148716534 (-)
CBA/J	MGP_CBAJ_G0037483	snRNA gene	Chr3:160423888-160423990 (-)
DBA/2J	MGP_DBA2J_G0037667	snRNA gene	Chr3:143667360-143667462 (-)
FVB/NJ	MGP_FVBNJ_G0037615	snRNA gene	Chr3:141083354-141083456 (-)
LP/J	MGP_LPJ_G0037716	snRNA gene	Chr3:151271699-151271801 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037627	snRNA gene	Chr3:168701026-168701128 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038477	snRNA gene	Chr3:147960457-147960559 (-)
PWK/PhJ	MGP_PWKPhJ_G0036366	snRNA gene	Chr3:143522085-143522187 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036144	snRNA gene	Chr3:146125225-146125327 (-)
WSB/EiJ	MGP_WSBEiJ_G0036887	snRNA gene	Chr3:148928446-148928548 (-)

Homology

• Gene Tree
  Gm22078
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088218 (Evidence)
• NCBI Gene
  115489796

Representative Sequences			Length	Strain/Species
genomic	115489796	NCBI Gene Model | MGI Sequence Detail	103	C57BL/6J
transcript	XR_004941679	RefSeq | MGI Sequence Detail	103	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;