Gm22139 Gene Detail

Summary

• Symbol
  Gm22139
• Name
  predicted gene, 22139

• Feature Type
  snRNA gene
• IDs
  MGI:5451916
  NCBI Gene: 115489200
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:126235113-126235217 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  179 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5451916	snRNA gene	ChrX:126235113-126235217 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038346	snRNA gene	ChrX:124335471-124335575 (+)
A/J	MGP_AJ_G0038339	snRNA gene	ChrX:123758122-123758226 (+)
AKR/J	MGP_AKRJ_G0038278	snRNA gene	ChrX:127802094-127802198 (+)
BALB/cJ	MGP_BALBcJ_G0038323	snRNA gene	ChrX:122279959-122280063 (+)
C3H/HeJ	MGP_C3HHeJ_G0037989	snRNA gene	ChrX:124438822-124438926 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038861	snRNA gene	ChrX:127957051-127957155 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035044	snRNA gene	Chr16:83856517-83856622 (-)
CAST/EiJ	MGP_CASTEiJ_G0037133	snRNA gene	ChrX:105524253-105524357 (+)
CBA/J	MGP_CBAJ_G0037958	snRNA gene	ChrX:131750262-131750366 (+)
DBA/2J	MGP_DBA2J_G0038152	snRNA gene	ChrX:123210846-123210950 (+)
FVB/NJ	MGP_FVBNJ_G0038099	snRNA gene	ChrX:122496851-122496955 (+)
LP/J	MGP_LPJ_G0038191	snRNA gene	ChrX:125181483-125181587 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038097	snRNA gene	ChrX:138414557-138414661 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038967	snRNA gene	ChrX:123795604-123795708 (+)
PWK/PhJ	MGP_PWKPhJ_G0036824	snRNA gene	ChrX:102550314-102550418 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036584	snRNA gene	ChrX:105977358-105977462 (+)
WSB/EiJ	MGP_WSBEiJ_G0037363	snRNA gene	ChrX:122328934-122329038 (+)

Homology

• Gene Tree
  Gm22139
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089372 (Evidence)
• NCBI Gene
  115489200

Representative Sequences			Length	Strain/Species
genomic	115489200	NCBI Gene Model | MGI Sequence Detail	105	C57BL/6J
transcript	XR_004940504	RefSeq | MGI Sequence Detail	105	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;