Gm22215 Gene Detail

Summary

• Symbol
  Gm22215
• Name
  predicted gene, 22215

• Feature Type
  snRNA gene
• IDs
  MGI:5451992
  NCBI Gene: 115488890
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:80340943-80341038 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5451992	snRNA gene	Chr17:80340936-80341038 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037643	snRNA gene	Chr17:82919819-82919914 (+)
A/J	MGP_AJ_G0037636	snRNA gene	Chr17:80380873-80380968 (+)
AKR/J	MGP_AKRJ_G0037574	snRNA gene	Chr17:81627282-81627377 (+)
BALB/cJ	MGP_BALBcJ_G0037620	snRNA gene	Chr17:80261250-80261345 (+)
C3H/HeJ	MGP_C3HHeJ_G0037294	snRNA gene	Chr17:82510632-82510727 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038144	snRNA gene	Chr17:85945631-85945726 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035076	snRNA gene	Chr17:75761807-75761902 (+)
CAST/EiJ	MGP_CASTEiJ_G0036460	snRNA gene	Chr17:83179758-83179853 (+)
CBA/J	MGP_CBAJ_G0037267	snRNA gene	Chr17:89517725-89517820 (+)
DBA/2J	MGP_DBA2J_G0037447	snRNA gene	Chr17:78895450-78895545 (+)
FVB/NJ	MGP_FVBNJ_G0037393	snRNA gene	Chr17:78388246-78388341 (+)
LP/J	MGP_LPJ_G0037499	snRNA gene	Chr17:83769752-83769847 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037407	snRNA gene	Chr17:89589814-89589909 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038254	snRNA gene	Chr17:82103072-82103167 (+)
PWK/PhJ	MGP_PWKPhJ_G0036153	snRNA gene	Chr17:78417926-78418021 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035939	snRNA gene	Chr17:78896722-78896818 (+)
WSB/EiJ	MGP_WSBEiJ_G0036676	snRNA gene	Chr17:82935286-82935381 (+)

Homology

• Gene Tree
  Gm22215
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088183 (Evidence)
• NCBI Gene
  115488890

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000088183	Ensembl Gene Model | MGI Sequence Detail	96	C57BL/6J
transcript	ENSMUST00000157558	Ensembl | MGI Sequence Detail	96	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;