Gm22334 Gene Detail

Summary

• Symbol
  Gm22334
• Name
  predicted gene, 22334

• Feature Type
  snoRNA gene
• IDs
  MGI:5452111
  NCBI Gene: 115486131
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:155494812-155494944 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452111	snoRNA gene	Chr2:155494812-155494944 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039054	snoRNA gene	Chr2:160488971-160489103 (-)
A/J	MGP_AJ_G0039050	snoRNA gene	Chr2:154109191-154109323 (-)
AKR/J	MGP_AKRJ_G0038981	snoRNA gene	Chr2:158579264-158579396 (-)
BALB/cJ	MGP_BALBcJ_G0039033	snoRNA gene	Chr2:154412208-154412340 (-)
C3H/HeJ	MGP_C3HHeJ_G0038695	snoRNA gene	Chr2:158942022-158942154 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039581	snoRNA gene	Chr2:165191314-165191446 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036293	snoRNA gene	Chr2:147609548-147609680 (-)
CAST/EiJ	MGP_CASTEiJ_G0037832	snoRNA gene	Chr2:159256175-159256307 (-)
CBA/J	MGP_CBAJ_G0038666	snoRNA gene	Chr2:171196136-171196268 (-)
DBA/2J	MGP_DBA2J_G0038852	snoRNA gene	Chr2:153289910-153290042 (-)
FVB/NJ	MGP_FVBNJ_G0038806	snoRNA gene	Chr2:151667655-151667787 (-)
LP/J	MGP_LPJ_G0038895	snoRNA gene	Chr2:160633187-160633319 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038807	snoRNA gene	Chr2:175184736-175184868 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039681	snoRNA gene	Chr2:158466270-158466402 (-)
PWK/PhJ	MGP_PWKPhJ_G0037519	snoRNA gene	Chr2:152787325-152787457 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037269	snoRNA gene	Chr2:157391438-157391570 (-)
WSB/EiJ	MGP_WSBEiJ_G0038059	snoRNA gene	Chr2:159353248-159353380 (-)

Homology

• Gene Tree
  Gm22334
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088695 (Evidence)
• NCBI Gene
  115486131

Representative Sequences			Length	Strain/Species
genomic	115486131	NCBI Gene Model | MGI Sequence Detail	133	C57BL/6J
transcript	XR_004941172	RefSeq | MGI Sequence Detail	133	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm22334:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr27004	Chr2:155495455-155495474 (-)	-521 bp