Gm22335 Gene Detail

Summary

• Symbol
  Gm22335
• Name
  predicted gene, 22335

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5452112
  NCBI Gene: 115490027
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:116884408-116884506 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452112	snRNA gene	Chr4:116884408-116884506 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037929	snRNA gene	Chr4:117977221-117977319 (+)
A/J	MGP_AJ_G0037915	snRNA gene	Chr4:113431057-113431155 (+)
AKR/J	MGP_AKRJ_G0037854	snRNA gene	Chr4:115909101-115909199 (+)
BALB/cJ	MGP_BALBcJ_G0037900	snRNA gene	Chr4:114062219-114062317 (+)
C3H/HeJ	MGP_C3HHeJ_G0037574	snRNA gene	Chr4:117473089-117473187 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038429	snRNA gene	Chr4:122527126-122527224 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035308	snRNA gene	Chr4:107474902-107475003 (+)
CAST/EiJ	MGP_CASTEiJ_G0036733	snRNA gene	Chr4:114692619-114692717 (+)
CBA/J	MGP_CBAJ_G0037547	snRNA gene	Chr4:125872674-125872772 (+)
DBA/2J	MGP_DBA2J_G0037731	snRNA gene	Chr4:114066871-114066969 (+)
FVB/NJ	MGP_FVBNJ_G0037678	snRNA gene	Chr4:112570608-112570706 (+)
LP/J	MGP_LPJ_G0037777	snRNA gene	Chr4:118158114-118158212 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037689	snRNA gene	Chr4:130824154-130824252 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038541	snRNA gene	Chr4:117056817-117056915 (+)
PWK/PhJ	MGP_PWKPhJ_G0036424	snRNA gene	Chr4:110853906-110854007 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036199	snRNA gene	Chr4:113347009-113347110 (+)
WSB/EiJ	MGP_WSBEiJ_G0036948	snRNA gene	Chr4:116923383-116923481 (+)

Homology

• Gene Tree
  Gm22335
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm22335
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000088349 (Evidence)
• NCBI Gene
  115490027

Representative Sequences			Length	Strain/Species
genomic	115490027	NCBI Gene Model | MGI Sequence Detail	99	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12