Gm22380 Gene Detail

Summary

• Symbol
  Gm22380
• Name
  predicted gene, 22380

• Feature Type
  snoRNA gene
  BioType Conflict
  
• IDs
  MGI:5452157
  NCBI Gene: 115485724
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:24262414-24262508 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452157	snoRNA gene	Chr9:24262414-24262508 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039507	snoRNA gene	Chr9:21700061-21700155 (+)
A/J	MGP_AJ_G0039510	snoRNA gene	Chr9:21278056-21278150 (+)
AKR/J	MGP_AKRJ_G0039432	snoRNA gene	Chr9:21670596-21670690 (+)
BALB/cJ	MGP_BALBcJ_G0039487	snoRNA gene	Chr9:21160632-21160726 (+)
C3H/HeJ	MGP_C3HHeJ_G0039147	snoRNA gene	Chr9:22011081-22011175 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040038	snoRNA gene	Chr9:22589772-22589866 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038275	snoRNA gene	Chr9:21867598-21867692 (+)
CBA/J	MGP_CBAJ_G0039114	snoRNA gene	Chr9:23369955-23370049 (+)
DBA/2J	MGP_DBA2J_G0039305	snoRNA gene	Chr9:21251185-21251279 (+)
FVB/NJ	MGP_FVBNJ_G0039262	snoRNA gene	Chr9:20758768-20758862 (+)
LP/J	MGP_LPJ_G0039348	snoRNA gene	Chr9:21909939-21910033 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039265	snoRNA gene	Chr9:24970379-24970473 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040136	snoRNA gene	Chr9:21652142-21652236 (+)
PWK/PhJ	MGP_PWKPhJ_G0037949	snoRNA gene	Chr9:21204302-21204396 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037703	snoRNA gene	Chr9:21672005-21672099 (+)
WSB/EiJ	MGP_WSBEiJ_G0038500	snoRNA gene	Chr9:21394933-21395027 (+)

Homology

• Gene Tree
  Gm22380
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000088104 (Evidence)
• NCBI Gene
  115485724

Representative Sequences			Length	Strain/Species
genomic	115485724	NCBI Gene Model | MGI Sequence Detail	95	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;