Gm22452 Gene Detail

Summary

• Symbol
  Gm22452
• Name
  predicted gene, 22452

• Feature Type
  snRNA gene
• IDs
  MGI:5452229
  NCBI Gene: 115488259
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:23847004-23847107 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452229	snRNA gene	Chr13:23847004-23847107 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037419	snRNA gene	Chr13:21095902-21096005 (+)
A/J	MGP_AJ_G0037413	snRNA gene	Chr13:20708409-20708512 (+)
AKR/J	MGP_AKRJ_G0037353	snRNA gene	Chr13:20963519-20963622 (+)
BALB/cJ	MGP_BALBcJ_G0037399	snRNA gene	Chr13:20702880-20702983 (+)
C3H/HeJ	MGP_C3HHeJ_G0037077	snRNA gene	Chr13:21031246-21031349 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037916	snRNA gene	Chr13:21874099-21874202 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034897	snRNA gene	Chr13:19492697-19492800 (+)
CAST/EiJ	MGP_CASTEiJ_G0036252	snRNA gene	Chr13:20711731-20711834 (+)
CBA/J	MGP_CBAJ_G0037051	snRNA gene	Chr13:22715577-22715680 (+)
DBA/2J	MGP_DBA2J_G0037229	snRNA gene	Chr13:20242488-20242591 (+)
FVB/NJ	MGP_FVBNJ_G0037176	snRNA gene	Chr13:19894257-19894360 (+)
LP/J	MGP_LPJ_G0037279	snRNA gene	Chr13:21407469-21407572 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037192	snRNA gene	Chr13:23022037-23022140 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038032	snRNA gene	Chr13:20808432-20808535 (+)
PWK/PhJ	MGP_PWKPhJ_G0035947	snRNA gene	Chr13:20267524-20267627 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035739	snRNA gene	Chr13:19611804-19611907 (+)
WSB/EiJ	MGP_WSBEiJ_G0036462	snRNA gene	Chr13:20954808-20954911 (+)

Homology

• Gene Tree
  Gm22452
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm22452
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084753 (Evidence)
• NCBI Gene
  115488259

Representative Sequences			Length	Strain/Species
genomic	115488259	NCBI Gene Model | MGI Sequence Detail	104	C57BL/6J
transcript	XR_004938331	RefSeq | MGI Sequence Detail	104	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:71411 Arkell RM, et al., Genetic, physical, and phenotypic characterization of the Del(13)Svea36H mouse. Mamm Genome. 2001 Sep;12(9):687-94
• Latest
  J:141688 Goldsworthy M, et al., Role of the transcription factor sox4 in insulin secretion and impaired glucose tolerance. Diabetes. 2008 Aug;57(8):2234-44