Gm22455 Gene Detail

Summary

• Symbol
  Gm22455
• Name
  predicted gene, 22455

• Feature Type
  snoRNA gene
• IDs
  MGI:5452232
  NCBI Gene: 115487261
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:64084405-64084475 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452232	snoRNA gene	Chr9:64084405-64084475 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039530	snoRNA gene	Chr9:63822893-63822963 (+)
A/J	MGP_AJ_G0039532	snoRNA gene	Chr9:61694438-61694508 (+)
AKR/J	MGP_AKRJ_G0039455	snoRNA gene	Chr9:63122786-63122856 (+)
BALB/cJ	MGP_BALBcJ_G0039510	snoRNA gene	Chr9:61417517-61417587 (+)
C3H/HeJ	MGP_C3HHeJ_G0039170	snoRNA gene	Chr9:63655468-63655538 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040061	snoRNA gene	Chr9:65555528-65555598 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036709	snoRNA gene	Chr9:61347509-61347579 (+)
CAST/EiJ	MGP_CASTEiJ_G0038298	snoRNA gene	Chr9:63815344-63815414 (+)
CBA/J	MGP_CBAJ_G0039137	snoRNA gene	Chr9:67818894-67818964 (+)
DBA/2J	MGP_DBA2J_G0039328	snoRNA gene	Chr9:61475706-61475776 (+)
FVB/NJ	MGP_FVBNJ_G0039285	snoRNA gene	Chr9:60778144-60778214 (+)
LP/J	MGP_LPJ_G0039371	snoRNA gene	Chr9:64112383-64112453 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039288	snoRNA gene	Chr9:69118578-69118648 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040159	snoRNA gene	Chr9:63235035-63235105 (+)
PWK/PhJ	MGP_PWKPhJ_G0037972	snoRNA gene	Chr9:61630913-61630983 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037725	snoRNA gene	Chr9:63508600-63508670 (+)
WSB/EiJ	MGP_WSBEiJ_G0038523	snoRNA gene	Chr9:63133586-63133656 (+)

Homology

• Gene Tree
  Gm22455
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000064514 (Evidence)
• NCBI Gene
  115487261

Representative Sequences			Length	Strain/Species
genomic	115487261	NCBI Gene Model | MGI Sequence Detail	71	C57BL/6J
transcript	XR_004935893	RefSeq | MGI Sequence Detail	71	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm22455:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr85600	Chr9:64084251-64084300 (+)	-129 bp