Gm22490 Gene Detail

Summary

• Symbol
  Gm22490
• Name
  predicted gene, 22490

• Feature Type
  snoRNA gene
• IDs
  MGI:5452267
  NCBI Gene: 115490289
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:21322081-21322199 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452267	snoRNA gene	Chr5:21322081-21322199 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039244	snoRNA gene	Chr5:18649348-18649466 (-)
A/J	MGP_AJ_G0039240	snoRNA gene	Chr5:18052344-18052462 (-)
AKR/J	MGP_AKRJ_G0039170	snoRNA gene	Chr5:18734808-18734926 (-)
BALB/cJ	MGP_BALBcJ_G0039223	snoRNA gene	Chr5:18493279-18493397 (-)
C3H/HeJ	MGP_C3HHeJ_G0038884	snoRNA gene	Chr5:18806944-18807062 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039771	snoRNA gene	Chr5:20026475-20026593 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036467	snoRNA gene	Chr5:16122321-16122445 (-)
CAST/EiJ	MGP_CASTEiJ_G0038017	snoRNA gene	Chr5:18128152-18128270 (-)
CBA/J	MGP_CBAJ_G0038855	snoRNA gene	Chr5:20245027-20245145 (-)
DBA/2J	MGP_DBA2J_G0039040	snoRNA gene	Chr5:18340613-18340731 (-)
FVB/NJ	MGP_FVBNJ_G0038995	snoRNA gene	Chr5:17749322-17749440 (-)
LP/J	MGP_LPJ_G0039084	snoRNA gene	Chr5:19065766-19065884 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038996	snoRNA gene	Chr5:21563953-21564071 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039870	snoRNA gene	Chr5:18404053-18404171 (-)
PWK/PhJ	MGP_PWKPhJ_G0037703	snoRNA gene	Chr5:17392363-17392481 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037451	snoRNA gene	Chr5:17762973-17763091 (-)
WSB/EiJ	MGP_WSBEiJ_G0038246	snoRNA gene	Chr5:18456410-18456528 (-)

Homology

• Gene Tree
  Gm22490
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000087813 (Evidence)
• NCBI Gene
  115490289

Representative Sequences			Length	Strain/Species
genomic	115490289	NCBI Gene Model | MGI Sequence Detail	119	C57BL/6J
transcript	XR_004942856	RefSeq | MGI Sequence Detail	119	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;