Gm22534 Gene Detail

Summary

• Symbol
  Gm22534
• Name
  predicted gene, 22534

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5452311
  NCBI Gene: 115487910
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:88977874-88977977 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  44 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452311	snRNA gene	Chr11:88977874-88977977 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037342	snRNA gene	Chr11:90855145-90855248 (-)
A/J	MGP_AJ_G0037328	snRNA gene	Chr11:87313200-87313303 (-)
AKR/J	MGP_AKRJ_G0037273	snRNA gene	Chr11:89990041-89990144 (-)
BALB/cJ	MGP_BALBcJ_G0037318	snRNA gene	Chr11:87734840-87734943 (-)
C3H/HeJ	MGP_C3HHeJ_G0037002	snRNA gene	Chr11:90014225-90014328 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037833	snRNA gene	Chr11:93652873-93652976 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034840	snRNA gene	Chr11:84339340-84339443 (-)
CAST/EiJ	MGP_CASTEiJ_G0036179	snRNA gene	Chr11:90720369-90720472 (-)
CBA/J	MGP_CBAJ_G0036974	snRNA gene	Chr11:97630606-97630709 (-)
DBA/2J	MGP_DBA2J_G0037151	snRNA gene	Chr11:86861757-86861860 (-)
FVB/NJ	MGP_FVBNJ_G0037100	snRNA gene	Chr11:86365373-86365476 (-)
LP/J	MGP_LPJ_G0037200	snRNA gene	Chr11:91378852-91378955 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037110	snRNA gene	Chr11:97530375-97530478 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037951	snRNA gene	Chr11:90194293-90194396 (-)
PWK/PhJ	MGP_PWKPhJ_G0035877	snRNA gene	Chr11:87728495-87728600 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035675	snRNA gene	Chr11:89781113-89781216 (-)
WSB/EiJ	MGP_WSBEiJ_G0036389	snRNA gene	Chr11:90088579-90088682 (-)

Homology

• Gene Tree
  Gm22534
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  3
• Targeted
  3
• Genomic Mutations
  3 involving Gm22534
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000088798 (Evidence)
• NCBI Gene
  115487910

Representative Sequences			Length	Strain/Species
genomic	115487910	NCBI Gene Model | MGI Sequence Detail	104	C57BL/6J

References

• Summaries
  All 9

  Diseases 1

  Phenotypes 6
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52