Gm22571 Gene Detail

Summary

• Symbol
  Gm22571
• Name
  predicted gene, 22571

• Feature Type
  snoRNA gene
• IDs
  MGI:5452348
  NCBI Gene: 115487260
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:64083155-64083224 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452348	snoRNA gene	Chr9:64083153-64083224 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039528	snoRNA gene	Chr9:63821643-63821712 (+)
A/J	MGP_AJ_G0039530	snoRNA gene	Chr9:61693188-61693257 (+)
AKR/J	MGP_AKRJ_G0039453	snoRNA gene	Chr9:63121536-63121605 (+)
BALB/cJ	MGP_BALBcJ_G0039508	snoRNA gene	Chr9:61416267-61416336 (+)
C3H/HeJ	MGP_C3HHeJ_G0039168	snoRNA gene	Chr9:63654218-63654287 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040059	snoRNA gene	Chr9:65554278-65554347 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036707	snoRNA gene	Chr9:61346213-61346282 (+)
CAST/EiJ	MGP_CASTEiJ_G0038296	snoRNA gene	Chr9:63814086-63814155 (+)
CBA/J	MGP_CBAJ_G0039135	snoRNA gene	Chr9:67817644-67817713 (+)
DBA/2J	MGP_DBA2J_G0039326	snoRNA gene	Chr9:61474456-61474525 (+)
FVB/NJ	MGP_FVBNJ_G0039283	snoRNA gene	Chr9:60776894-60776963 (+)
LP/J	MGP_LPJ_G0039369	snoRNA gene	Chr9:64111133-64111202 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039286	snoRNA gene	Chr9:69117326-69117395 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040157	snoRNA gene	Chr9:63233785-63233854 (+)
PWK/PhJ	MGP_PWKPhJ_G0037970	snoRNA gene	Chr9:61629549-61629618 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037723	snoRNA gene	Chr9:63507332-63507401 (+)
WSB/EiJ	MGP_WSBEiJ_G0038521	snoRNA gene	Chr9:63132335-63132404 (+)

Homology

• Gene Tree
  Gm22571
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000064918 (Evidence)
• NCBI Gene
  115487260

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000064918	Ensembl Gene Model | MGI Sequence Detail	70	C57BL/6J
transcript	ENSMUST00000082984	Ensembl | MGI Sequence Detail	70	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm22571:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr85599	Chr9:64082870-64082895 (+)	-272 bp