Gm22588 Gene Detail

Summary

• Symbol
  Gm22588
• Name
  predicted gene, 22588

• Feature Type
  snoRNA gene
• IDs
  MGI:5452365
  NCBI Gene: 115485858
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:29799461-29799600 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452365	snoRNA gene	Chr11:29799461-29799600 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038558	snoRNA gene	Chr11:27892448-27892587 (+)
A/J	MGP_AJ_G0038548	snoRNA gene	Chr11:26841231-26841370 (+)
AKR/J	MGP_AKRJ_G0038486	snoRNA gene	Chr11:27715082-27715221 (+)
BALB/cJ	MGP_BALBcJ_G0038535	snoRNA gene	Chr11:27051887-27052026 (+)
C3H/HeJ	MGP_C3HHeJ_G0038198	snoRNA gene	Chr11:27634682-27634822 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039073	snoRNA gene	Chr11:28833588-28833727 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035851	snoRNA gene	Chr11:25471484-25471625 (+)
CAST/EiJ	MGP_CASTEiJ_G0037342	snoRNA gene	Chr11:27705758-27705898 (+)
CBA/J	MGP_CBAJ_G0038170	snoRNA gene	Chr11:30168137-30168276 (+)
DBA/2J	MGP_DBA2J_G0038360	snoRNA gene	Chr11:26697902-26698041 (+)
FVB/NJ	MGP_FVBNJ_G0038310	snoRNA gene	Chr11:26511762-26511901 (+)
LP/J	MGP_LPJ_G0038400	snoRNA gene	Chr11:28133667-28133806 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038310	snoRNA gene	Chr11:31305028-31305167 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039182	snoRNA gene	Chr11:27841583-27841722 (+)
PWK/PhJ	MGP_PWKPhJ_G0037028	snoRNA gene	Chr11:26792471-26792610 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036784	snoRNA gene	Chr11:27536372-27536510 (+)
WSB/EiJ	MGP_WSBEiJ_G0037573	snoRNA gene	Chr11:27524296-27524435 (+)

Homology

• Gene Tree
  Gm22588
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088135 (Evidence)
• NCBI Gene
  115485858

Representative Sequences			Length	Strain/Species
genomic	115485858	NCBI Gene Model | MGI Sequence Detail	140	C57BL/6J
transcript	XR_004937375	RefSeq | MGI Sequence Detail	140	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:293217 GemPharmatech, GemPharmatech Website. 2020;