Gm22598 Gene Detail

Summary

• Symbol
  Gm22598
• Name
  predicted gene, 22598

• Feature Type
  snoRNA gene
• IDs
  MGI:5452375
  NCBI Gene: 115488710
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:3353349-3353475 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452375	snoRNA gene	Chr16:3353349-3353475 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0038876	snoRNA gene	Chr17:101056-101183 (-)
AKR/J	MGP_AKRJ_G0038761	snoRNA gene	Chr16:1571-1697 (-)
BALB/cJ	MGP_BALBcJ_G0038626	snoRNA gene	Chr12:79206516-79206643 (+)
C3H/HeJ	MGP_C3HHeJ_G0038473	snoRNA gene	Chr16:12876-13002 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039408	snoRNA gene	Chr17:85152-85278 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035759	snoRNA gene	Chr1:153644890-153645015 (+)
CAST/EiJ	MGP_CASTEiJ_G0037432	snoRNA gene	Chr12:76465619-76465746 (+)
CBA/J	MGP_CBAJ_G0038445	snoRNA gene	Chr16:13325-13451 (-)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0038402	snoRNA gene	Chr12:77409106-77409233 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0039074	snoRNA gene	Chr6:76473890-76474016 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0036933	snoRNA gene	Chr1:159738510-159738638 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036689	snoRNA gene	Chr1:165256913-165257038 (+)
WSB/EiJ	MGP_WSBEiJ_G0037479	snoRNA gene	Chr1:166521201-166521329 (+)

Homology

• Gene Tree
  Gm22598
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000088225 (Evidence)
• NCBI Gene
  115488710

Representative Sequences			Length	Strain/Species
genomic	115488710	NCBI Gene Model | MGI Sequence Detail	127	C57BL/6J
transcript	XR_004939412	RefSeq | MGI Sequence Detail	127	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;