Gm22685 Gene Detail

Summary

• Symbol
  Gm22685
• Name
  predicted gene, 22685

• Feature Type
  snRNA gene
• IDs
  MGI:5452462
  NCBI Gene: 115490100
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:49289298-49289403 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452462	snRNA gene	Chr4:49289298-49289403 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037897	snRNA gene	Chr4:47739231-47739336 (+)
A/J	MGP_AJ_G0037882	snRNA gene	Chr4:45959074-45959179 (+)
AKR/J	MGP_AKRJ_G0037823	snRNA gene	Chr4:47149360-47149465 (+)
BALB/cJ	MGP_BALBcJ_G0037868	snRNA gene	Chr4:46088768-46088873 (+)
C3H/HeJ	MGP_C3HHeJ_G0037542	snRNA gene	Chr4:47726043-47726148 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038396	snRNA gene	Chr4:49462592-49462697 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0036702	snRNA gene	Chr4:47333198-47333303 (+)
CBA/J	MGP_CBAJ_G0037515	snRNA gene	Chr4:51083224-51083329 (+)
DBA/2J	MGP_DBA2J_G0037699	snRNA gene	Chr4:45849797-45849902 (+)
FVB/NJ	MGP_FVBNJ_G0037646	snRNA gene	Chr4:45115383-45115488 (+)
LP/J	MGP_LPJ_G0037746	snRNA gene	Chr4:47811551-47811656 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037657	snRNA gene	Chr4:54064857-54064962 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038508	snRNA gene	Chr4:47354442-47354547 (+)
PWK/PhJ	MGP_PWKPhJ_G0036393	snRNA gene	Chr4:45975314-45975419 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036170	snRNA gene	Chr4:46855198-46855303 (+)
WSB/EiJ	MGP_WSBEiJ_G0036916	snRNA gene	Chr4:47275997-47276102 (+)

Homology

• Gene Tree
  Gm22685
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000064782 (Evidence)
• NCBI Gene
  115490100

Representative Sequences			Length	Strain/Species
genomic	115490100	NCBI Gene Model | MGI Sequence Detail	106	C57BL/6J
transcript	XR_004942413	RefSeq | MGI Sequence Detail	106	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;