Gm22728 Gene Detail

Summary

• Symbol
  Gm22728
• Name
  predicted gene, 22728

• Feature Type
  snoRNA gene
• IDs
  MGI:5452505
  NCBI Gene: 115490275
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:92203923-92204051 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  56 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452505	snoRNA gene	Chr5:92203923-92204051 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0036842	snoRNA gene	Chr5:93210272-93210400 (-)
A/J	MGP_AJ_G0036830	snoRNA gene	Chr5:89513340-89513468 (-)
AKR/J	MGP_AKRJ_G0036779	snoRNA gene	Chr5:92443494-92443622 (-)
BALB/cJ	MGP_BALBcJ_G0036821	snoRNA gene	Chr5:90401850-90401978 (-)
C3H/HeJ	MGP_C3HHeJ_G0036507	snoRNA gene	Chr5:92848043-92848171 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037335	snoRNA gene	Chr5:96923775-96923903 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034397	snoRNA gene	Chr5:85158140-85158268 (-)
CAST/EiJ	MGP_CASTEiJ_G0035696	snoRNA gene	Chr5:92220495-92220623 (-)
CBA/J	MGP_CBAJ_G0036482	snoRNA gene	Chr5:100252787-100252915 (-)
DBA/2J	MGP_DBA2J_G0036658	snoRNA gene	Chr5:89563463-89563591 (-)
FVB/NJ	MGP_FVBNJ_G0036611	snoRNA gene	Chr5:88413383-88413511 (-)
LP/J	MGP_LPJ_G0036705	snoRNA gene	Chr5:93579140-93579268 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036616	snoRNA gene	Chr5:105201863-105201991 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037450	snoRNA gene	Chr5:91968776-91968904 (-)
PWK/PhJ	MGP_PWKPhJ_G0035390	snoRNA gene	Chr5:88620657-88620785 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035204	snoRNA gene	Chr5:91329240-91329368 (-)
WSB/EiJ	MGP_WSBEiJ_G0035899	snoRNA gene	Chr5:92429288-92429416 (-)

Homology

• Gene Tree
  Gm22728
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088712 (Evidence)
• NCBI Gene
  115490275

Representative Sequences			Length	Strain/Species
genomic	115490275	NCBI Gene Model | MGI Sequence Detail	129	C57BL/6J
transcript	XR_004942824	RefSeq | MGI Sequence Detail	129	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;