Gm22744 Gene Detail

Summary

• Symbol
  Gm22744
• Name
  predicted gene, 22744

• Feature Type
  snoRNA gene
• IDs
  MGI:5452521
  NCBI Gene: 115489081
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:8702456-8702520 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452521	snoRNA gene	Chr19:8702456-8702520 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038954	snoRNA gene	Chr19:5993525-5993589 (+)
A/J	MGP_AJ_G0038949	snoRNA gene	Chr19:5676788-5676852 (+)
AKR/J	MGP_AKRJ_G0038884	snoRNA gene	Chr19:5762855-5762919 (+)
BALB/cJ	MGP_BALBcJ_G0038932	snoRNA gene	Chr19:5779567-5779631 (+)
C3H/HeJ	MGP_C3HHeJ_G0038596	snoRNA gene	Chr19:5846141-5846205 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039482	snoRNA gene	Chr19:6113818-6113882 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036207	snoRNA gene	Chr19:5917348-5917412 (+)
CAST/EiJ	MGP_CASTEiJ_G0037737	snoRNA gene	Chr19:5493948-5494012 (+)
CBA/J	MGP_CBAJ_G0038567	snoRNA gene	Chr19:6226411-6226475 (+)
DBA/2J	MGP_DBA2J_G0038756	snoRNA gene	Chr19:5506901-5506965 (+)
FVB/NJ	MGP_FVBNJ_G0038708	snoRNA gene	Chr19:5582609-5582673 (+)
LP/J	MGP_LPJ_G0038796	snoRNA gene	Chr19:5885252-5885316 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038709	snoRNA gene	Chr19:6101837-6101901 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039583	snoRNA gene	Chr19:5806241-5806305 (+)
PWK/PhJ	MGP_PWKPhJ_G0037421	snoRNA gene	Chr19:5172434-5172498 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037176	snoRNA gene	Chr19:5405970-5406034 (+)
WSB/EiJ	MGP_WSBEiJ_G0037965	snoRNA gene	Chr19:5772215-5772279 (+)

Homology

• Gene Tree
  Gm22744
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000065378 (Evidence)
• NCBI Gene
  115489081

Representative Sequences			Length	Strain/Species
genomic	115489081	NCBI Gene Model | MGI Sequence Detail	65	C57BL/6J
transcript	XR_004940301	RefSeq | MGI Sequence Detail	65	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm22744:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr154803	Chr19:8702458-8702461 (+)	4 bp