Gm22841 Gene Detail

Summary

• Symbol
  Gm22841
• Name
  predicted gene, 22841

• Feature Type
  snRNA gene
• IDs
  MGI:5452618
  NCBI Gene: 115487033
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:53946888-53946949 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  178 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452618	snRNA gene	Chr8:53946888-53946949 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038184	snRNA gene	Chr8:53077989-53078050 (+)
A/J	MGP_AJ_G0038177	snRNA gene	Chr8:50886863-50886924 (+)
AKR/J	MGP_AKRJ_G0038116	snRNA gene	Chr8:52299267-52299328 (+)
BALB/cJ	MGP_BALBcJ_G0038162	snRNA gene	Chr8:51108786-51108847 (+)
C3H/HeJ	MGP_C3HHeJ_G0037832	snRNA gene	Chr8:53007719-53007780 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038694	snRNA gene	Chr8:55074996-55075057 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035518	snRNA gene	Chr8:46764642-46764703 (+)
CAST/EiJ	MGP_CASTEiJ_G0036980	snRNA gene	Chr8:52598185-52598246 (+)
CBA/J	MGP_CBAJ_G0037805	snRNA gene	Chr8:57107326-57107387 (+)
DBA/2J	MGP_DBA2J_G0037990	snRNA gene	Chr8:50684887-50684948 (+)
FVB/NJ	MGP_FVBNJ_G0037937	snRNA gene	Chr8:50022876-50022937 (+)
LP/J	MGP_LPJ_G0038029	snRNA gene	Chr8:53070615-53070676 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037942	snRNA gene	Chr8:58158047-58158108 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038804	snRNA gene	Chr8:52603258-52603319 (+)
PWK/PhJ	MGP_PWKPhJ_G0036670	snRNA gene	Chr8:50218601-50218662 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036437	snRNA gene	Chr8:51697502-51697563 (+)
WSB/EiJ	MGP_WSBEiJ_G0037204	snRNA gene	Chr8:52841995-52842056 (+)

Homology

• Gene Tree
  Gm22841
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089068 (Evidence)
• NCBI Gene
  115487033

Representative Sequences			Length	Strain/Species
genomic	115487033	NCBI Gene Model | MGI Sequence Detail	62	C57BL/6J
transcript	XR_004935211	RefSeq | MGI Sequence Detail	62	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;