Gm22866 Gene Detail

Summary

• Symbol
  Gm22866
• Name
  predicted gene, 22866

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5452643
  NCBI Gene: 115487264
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:90234048-90234224 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452643	snRNA gene	Chr9:90234048-90234224 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038271	snRNA gene	Chr9:91314383-91314559 (+)
A/J	MGP_AJ_G0038264	snRNA gene	Chr9:88154163-88154339 (+)
AKR/J	MGP_AKRJ_G0038203	snRNA gene	Chr9:90185827-90186003 (+)
BALB/cJ	MGP_BALBcJ_G0038250	snRNA gene	Chr9:87796363-87796539 (+)
C3H/HeJ	MGP_C3HHeJ_G0037916	snRNA gene	Chr9:90647269-90647445 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038784	snRNA gene	Chr9:93839269-93839445 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0037067	snRNA gene	Chr9:90430364-90430532 (+)
CBA/J	MGP_CBAJ_G0037888	snRNA gene	Chr9:97090676-97090852 (+)
DBA/2J	MGP_DBA2J_G0038077	snRNA gene	Chr9:87682014-87682190 (+)
FVB/NJ	MGP_FVBNJ_G0038025	snRNA gene	Chr9:86704263-86704439 (+)
LP/J	MGP_LPJ_G0038117	snRNA gene	Chr9:91512574-91512750 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038025	snRNA gene	Chr9:98704936-98705112 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038892	snRNA gene	Chr9:90438440-90438616 (+)
PWK/PhJ	MGP_PWKPhJ_G0036757	snRNA gene	Chr9:87851872-87852048 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036520	snRNA gene	Chr9:90505797-90505988 (+)
WSB/EiJ	MGP_WSBEiJ_G0037292	snRNA gene	Chr9:90330570-90330746 (+)

Homology

• Gene Tree
  Gm22866
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000065881 (Evidence)
• NCBI Gene
  115487264

Representative Sequences			Length	Strain/Species
genomic	115487264	NCBI Gene Model | MGI Sequence Detail	177	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm22866:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr86473	Chr9:90234045-90234051 (+)	0 bp