Gm22871 Gene Detail

Summary

• Symbol
  Gm22871
• Name
  predicted gene, 22871

• Feature Type
  snoRNA gene
• IDs
  MGI:5452648
  NCBI Gene: 115487515
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:77749632-77749685 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452648	snoRNA gene	Chr10:77749632-77749685 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038511	snoRNA gene	Chr10:78315245-78315298 (-)
A/J	MGP_AJ_G0038501	snoRNA gene	Chr10:75612820-75612873 (-)
AKR/J	MGP_AKRJ_G0038439	snoRNA gene	Chr10:77628078-77628131 (-)
BALB/cJ	MGP_BALBcJ_G0038488	snoRNA gene	Chr10:75780992-75781045 (-)
C3H/HeJ	MGP_C3HHeJ_G0038151	snoRNA gene	Chr10:77716200-77716253 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039026	snoRNA gene	Chr10:81099670-81099723 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035805	snoRNA gene	Chr10:71958548-71958601 (-)
CAST/EiJ	MGP_CASTEiJ_G0037295	snoRNA gene	Chr10:78039738-78039791 (-)
CBA/J	MGP_CBAJ_G0038123	snoRNA gene	Chr10:84169732-84169785 (-)
DBA/2J	MGP_DBA2J_G0038313	snoRNA gene	Chr10:74848113-74848166 (-)
FVB/NJ	MGP_FVBNJ_G0038264	snoRNA gene	Chr10:74023395-74023448 (-)
LP/J	MGP_LPJ_G0038353	snoRNA gene	Chr10:78761418-78761471 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038263	snoRNA gene	Chr10:86175906-86175959 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039135	snoRNA gene	Chr10:77663721-77663774 (-)
PWK/PhJ	MGP_PWKPhJ_G0036981	snoRNA gene	Chr10:74732816-74732869 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036737	snoRNA gene	Chr10:76882203-76882256 (-)
WSB/EiJ	MGP_WSBEiJ_G0037527	snoRNA gene	Chr10:77645880-77645933 (-)

Homology

• Gene Tree
  Gm22871
  

Human Diseases

• References
  2 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  23 phenotype references
  

• All Mutations and Alleles
  3
• Targeted
  3
• Genomic Mutations
  3 involving Gm22871
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000093443 (Evidence)
• NCBI Gene
  115487515

Representative Sequences			Length	Strain/Species
genomic	115487515	NCBI Gene Model | MGI Sequence Detail	54	C57BL/6J
transcript	XR_004936573	RefSeq | MGI Sequence Detail	54	C57BL/6J

References

• Summaries
  All 26

  Diseases 2

  Phenotypes 23
• Earliest
  J:167505 Duchon A, et al., Inducing segmental aneuploid mosaicism in the mouse through targeted asymmetric sister chromatid event of recombination. Genetics. 2008 Sep;180(1):51-9
• Latest
  J:351211 Wu Y, et al., Cathepsin B abundance, activity and microglial localisation in Alzheimer's disease-Down syndrome and early onset Alzheimer's disease; the role of elevated cystatin B. Acta Neuropathol Commun. 2023 Aug 14;11(1):132