Gm22958 Gene Detail

Summary

• Symbol
  Gm22958
• Name
  predicted gene, 22958

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5452735
  NCBI Gene: 115487543
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:123268471-123268650 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  127 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452735	snRNA gene	Chr10:123268471-123268654 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037281	snRNA gene	Chr10:126794223-126794406 (+)
A/J	MGP_AJ_G0037267	snRNA gene	Chr10:121727917-121728100 (+)
AKR/J	MGP_AKRJ_G0037211	snRNA gene	Chr10:125374093-125374276 (+)
BALB/cJ	MGP_BALBcJ_G0037258	snRNA gene	Chr10:122157173-122157356 (+)
C3H/HeJ	MGP_C3HHeJ_G0036941	snRNA gene	Chr10:125569285-125569468 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037772	snRNA gene	Chr10:131065072-131065255 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034790	snRNA gene	Chr10:115983155-115983338 (+)
CAST/EiJ	MGP_CASTEiJ_G0036120	snRNA gene	Chr10:125992791-125992974 (+)
CBA/J	MGP_CBAJ_G0036914	snRNA gene	Chr10:136421025-136421208 (+)
DBA/2J	MGP_DBA2J_G0037091	snRNA gene	Chr10:120864808-120864991 (+)
FVB/NJ	MGP_FVBNJ_G0037039	snRNA gene	Chr10:119833139-119833322 (+)
LP/J	MGP_LPJ_G0037139	snRNA gene	Chr10:127328534-127328717 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037051	snRNA gene	Chr10:138908458-138908641 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037889	snRNA gene	Chr10:125415433-125415616 (+)
PWK/PhJ	MGP_PWKPhJ_G0035818	snRNA gene	Chr10:120992627-120992810 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035617	snRNA gene	Chr10:124375506-124375690 (+)
WSB/EiJ	MGP_WSBEiJ_G0036329	snRNA gene	Chr10:125597009-125597192 (+)

Homology

• Gene Tree
  Gm22958
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000084461 (Evidence)
• NCBI Gene
  115487543

Representative Sequences			Length	Strain/Species
genomic	115487543	NCBI Gene Model | MGI Sequence Detail	180	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm22958:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr96083	Chr10:123268470-123268475 (+)	2 bp