Gm22979 Gene Detail

Summary

• Symbol
  Gm22979
• Name
  predicted gene, 22979

• Feature Type
  snRNA gene
• IDs
  MGI:5452756
  NCBI Gene: 115488545
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:36169942-36170100 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  91 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452756	snRNA gene	Chr15:36169942-36170100 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037511	snRNA gene	Chr15:34549428-34549586 (+)
A/J	MGP_AJ_G0037506	snRNA gene	Chr15:33251628-33251786 (+)
AKR/J	MGP_AKRJ_G0037446	snRNA gene	Chr15:34171345-34171503 (+)
BALB/cJ	MGP_BALBcJ_G0037492	snRNA gene	Chr15:33257389-33257547 (+)
C3H/HeJ	MGP_C3HHeJ_G0037171	snRNA gene	Chr15:34140988-34141146 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038010	snRNA gene	Chr15:35855068-35855226 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034976	snRNA gene	Chr15:31062639-31062797 (+)
CAST/EiJ	MGP_CASTEiJ_G0036342	snRNA gene	Chr15:34543356-34543514 (+)
CBA/J	MGP_CBAJ_G0037143	snRNA gene	Chr15:37014111-37014269 (+)
DBA/2J	MGP_DBA2J_G0037321	snRNA gene	Chr15:33074139-33074297 (+)
FVB/NJ	MGP_FVBNJ_G0037266	snRNA gene	Chr15:32473609-32473767 (+)
LP/J	MGP_LPJ_G0037370	snRNA gene	Chr15:34451529-34451687 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037281	snRNA gene	Chr15:40130889-40131047 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038125	snRNA gene	Chr15:34326271-34326429 (+)
PWK/PhJ	MGP_PWKPhJ_G0036034	snRNA gene	Chr15:33092032-33092190 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035826	snRNA gene	Chr15:34023685-34023843 (+)
WSB/EiJ	MGP_WSBEiJ_G0036554	snRNA gene	Chr15:34293577-34293735 (+)

Homology

• Gene Tree
  Gm22979
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000064543 (Evidence)
• NCBI Gene
  115488545

Representative Sequences			Length	Strain/Species
genomic	115488545	NCBI Gene Model | MGI Sequence Detail	159	C57BL/6J
transcript	XR_004939063	RefSeq | MGI Sequence Detail	159	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;