Gm23039 Gene Detail

Summary

• Symbol
  Gm23039
• Name
  predicted gene, 23039

• Feature Type
  snRNA gene
• IDs
  MGI:5452816
  NCBI Gene: 115487885
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:47803212-47803372 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  95 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452816	snRNA gene	Chr11:47803212-47803372 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037305	snRNA gene	Chr11:46907558-46907718 (-)
A/J	MGP_AJ_G0037291	snRNA gene	Chr11:45073128-45073288 (-)
AKR/J	MGP_AKRJ_G0037237	snRNA gene	Chr11:46420832-46420992 (-)
BALB/cJ	MGP_BALBcJ_G0037282	snRNA gene	Chr11:45244635-45244795 (-)
C3H/HeJ	MGP_C3HHeJ_G0036965	snRNA gene	Chr11:46444647-46444807 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037797	snRNA gene	Chr11:48291318-48291478 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034810	snRNA gene	Chr11:42947211-42947371 (-)
CAST/EiJ	MGP_CASTEiJ_G0036144	snRNA gene	Chr11:46604339-46604499 (-)
CBA/J	MGP_CBAJ_G0036938	snRNA gene	Chr11:50539000-50539160 (-)
DBA/2J	MGP_DBA2J_G0037115	snRNA gene	Chr11:44882066-44882226 (-)
FVB/NJ	MGP_FVBNJ_G0037063	snRNA gene	Chr11:44515227-44515387 (-)
LP/J	MGP_LPJ_G0037164	snRNA gene	Chr11:47134643-47134803 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037074	snRNA gene	Chr11:52058484-52058644 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037914	snRNA gene	Chr11:46600944-46601104 (-)
PWK/PhJ	MGP_PWKPhJ_G0035842	snRNA gene	Chr11:45298534-45298695 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035641	snRNA gene	Chr11:46372655-46372814 (-)
WSB/EiJ	MGP_WSBEiJ_G0036354	snRNA gene	Chr11:46225582-46225742 (-)

Homology

• Gene Tree
  Gm23039
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000065804 (Evidence)
• NCBI Gene
  115487885

Representative Sequences			Length	Strain/Species
genomic	115487885	NCBI Gene Model | MGI Sequence Detail	161	C57BL/6J
transcript	XR_004937334	RefSeq | MGI Sequence Detail	161	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;