Gm23097 Gene Detail

Summary

• Symbol
  Gm23097
• Name
  predicted gene, 23097

• Feature Type
  snRNA gene
• IDs
  MGI:5452874
  NCBI Gene: 115487343
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:6706342-6706446 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452874	snRNA gene	Chr9:6706342-6706446 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038219	snRNA gene	Chr9:3570454-3570558 (-)
A/J	MGP_AJ_G0038214	snRNA gene	Chr9:3629934-3630038 (-)
AKR/J	MGP_AKRJ_G0038154	snRNA gene	Chr9:3520259-3520363 (-)
BALB/cJ	MGP_BALBcJ_G0038200	snRNA gene	Chr9:3394696-3394800 (-)
C3H/HeJ	MGP_C3HHeJ_G0037866	snRNA gene	Chr9:3737846-3737950 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038732	snRNA gene	Chr9:3664017-3664121 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035548	snRNA gene	Chr9:3013078-3013184 (-)
CAST/EiJ	MGP_CASTEiJ_G0037016	snRNA gene	Chr9:3730461-3730565 (-)
CBA/J	MGP_CBAJ_G0037840	snRNA gene	Chr9:3781882-3781986 (-)
DBA/2J	MGP_DBA2J_G0038026	snRNA gene	Chr9:3553249-3553353 (-)
FVB/NJ	MGP_FVBNJ_G0037974	snRNA gene	Chr9:3357594-3357698 (-)
LP/J	MGP_LPJ_G0038065	snRNA gene	Chr9:3605737-3605841 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0038840	snRNA gene	Chr9:3513335-3513439 (-)
PWK/PhJ	MGP_PWKPhJ_G0036706	snRNA gene	Chr9:3715927-3716031 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036471	snRNA gene	Chr9:3785598-3785702 (-)
WSB/EiJ	MGP_WSBEiJ_G0037240	snRNA gene	Chr9:3519292-3519396 (-)

Homology

• Gene Tree
  Gm23097
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000065382 (Evidence)
• NCBI Gene
  115487343

Representative Sequences			Length	Strain/Species
genomic	115487343	NCBI Gene Model | MGI Sequence Detail	105	C57BL/6J
transcript	XR_004935990	RefSeq | MGI Sequence Detail	105	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;