Gm23230 Gene Detail

Summary

• Symbol
  Gm23230
• Name
  predicted gene, 23230

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5453007
  NCBI Gene: 115490077
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:114702182-114702314 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  78 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453007	snRNA gene	Chr4:114702182-114702314 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037926	snRNA gene	Chr4:115597700-115597832 (-)
A/J	MGP_AJ_G0037912	snRNA gene	Chr4:111188337-111188469 (-)
AKR/J	MGP_AKRJ_G0037851	snRNA gene	Chr4:113488206-113488338 (-)
BALB/cJ	MGP_BALBcJ_G0037897	snRNA gene	Chr4:111828210-111828342 (-)
C3H/HeJ	MGP_C3HHeJ_G0037571	snRNA gene	Chr4:115103572-115103704 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038426	snRNA gene	Chr4:120074923-120075055 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035306	snRNA gene	Chr4:105292621-105292757 (-)
CAST/EiJ	MGP_CASTEiJ_G0036730	snRNA gene	Chr4:112523019-112523151 (-)
CBA/J	MGP_CBAJ_G0037544	snRNA gene	Chr4:123183284-123183416 (-)
DBA/2J	MGP_DBA2J_G0037728	snRNA gene	Chr4:111836714-111836846 (-)
FVB/NJ	MGP_FVBNJ_G0037675	snRNA gene	Chr4:110301920-110302052 (-)
LP/J	MGP_LPJ_G0037774	snRNA gene	Chr4:115803197-115803329 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037686	snRNA gene	Chr4:128328409-128328541 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038538	snRNA gene	Chr4:114733417-114733549 (-)
PWK/PhJ	MGP_PWKPhJ_G0036421	snRNA gene	Chr4:108620565-108620697 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036196	snRNA gene	Chr4:111127656-111127788 (-)
WSB/EiJ	MGP_WSBEiJ_G0036945	snRNA gene	Chr4:114518524-114518656 (-)

Homology

• Gene Tree
  Gm23230
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm23230
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000087923 (Evidence)
• NCBI Gene
  115490077

Representative Sequences			Length	Strain/Species
genomic	115490077	NCBI Gene Model | MGI Sequence Detail	133	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12