Gm23262 Gene Detail

Summary

• Symbol
  Gm23262
• Name
  predicted gene, 23262

• Feature Type
  snoRNA gene
• IDs
  MGI:5453039
  NCBI Gene: 115486847
• Alliance
  gene page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr7:110675267-110675434 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  35 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453039	snoRNA gene	Chr7:110675267-110675434 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039412	snoRNA gene	Chr7:114589307-114589474 (-)
A/J	MGP_AJ_G0039410	snoRNA gene	Chr7:111744617-111744784 (-)
AKR/J	MGP_AKRJ_G0039334	snoRNA gene	Chr7:114562476-114562643 (-)
BALB/cJ	MGP_BALBcJ_G0039389	snoRNA gene	Chr7:111434800-111434967 (-)
C3H/HeJ	MGP_C3HHeJ_G0039049	snoRNA gene	Chr7:114547435-114547602 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039939	snoRNA gene	Chr7:119322089-119322256 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036606	snoRNA gene	Chr7:113356294-113356462 (-)
CAST/EiJ	MGP_CASTEiJ_G0038182	snoRNA gene	Chr7:106140994-106141161 (-)
CBA/J	MGP_CBAJ_G0039018	snoRNA gene	Chr7:123221225-123221392 (-)
DBA/2J	MGP_DBA2J_G0039206	snoRNA gene	Chr7:109843531-109843698 (-)
FVB/NJ	MGP_FVBNJ_G0039164	snoRNA gene	Chr7:109691674-109691841 (-)
LP/J	MGP_LPJ_G0039253	snoRNA gene	Chr7:116098230-116098397 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039167	snoRNA gene	Chr7:124867989-124868156 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040037	snoRNA gene	Chr7:113569577-113569744 (-)
PWK/PhJ	MGP_PWKPhJ_G0037855	snoRNA gene	Chr7:102675153-102675320 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037610	snoRNA gene	Chr7:100311121-100311287 (-)
WSB/EiJ	MGP_WSBEiJ_G0038407	snoRNA gene	Chr7:114421863-114422030 (-)

Homology

• Gene Tree
  Gm23262
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088948 (Evidence)
• NCBI Gene
  115486847

Representative Sequences			Length	Strain/Species
genomic	115486847	NCBI Gene Model | MGI Sequence Detail	168	C57BL/6J
transcript	XR_004934712	RefSeq | MGI Sequence Detail	168	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm23262:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr74291	Chr7:110677328-110677346 (-)	-1,903 bp
Tssr74290	Chr7:110675591-110675605 (-)	-164 bp
Tssr74289	Chr7:110675424-110675438 (-)	3 bp
Tssr74288	Chr7:110675385-110675401 (-)	41 bp
Tssr74287	Chr7:110675362-110675383 (-)	61 bp