Gm23331 Gene Detail

Summary

• Symbol
  Gm23331
• Name
  predicted gene, 23331

• Feature Type
  snRNA gene
• IDs
  MGI:5453108
  NCBI Gene: 115490255
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:60658176-60658283 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  57 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453108	snRNA gene	Chr5:60658176-60658283 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037987	snRNA gene	Chr5:59960582-59960689 (-)
A/J	MGP_AJ_G0037976	snRNA gene	Chr5:57677614-57677721 (-)
AKR/J	MGP_AKRJ_G0037915	snRNA gene	Chr5:59546746-59546853 (-)
BALB/cJ	MGP_BALBcJ_G0037960	snRNA gene	Chr5:58320345-58320452 (-)
C3H/HeJ	MGP_C3HHeJ_G0037633	snRNA gene	Chr5:59858646-59858753 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038491	snRNA gene	Chr5:62428319-62428426 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0036792	snRNA gene	Chr5:58900482-58900589 (-)
CBA/J	MGP_CBAJ_G0037606	snRNA gene	Chr5:64397132-64397239 (-)
DBA/2J	MGP_DBA2J_G0037790	snRNA gene	Chr5:57744443-57744550 (-)
FVB/NJ	MGP_FVBNJ_G0037737	snRNA gene	Chr5:56980585-56980692 (-)
LP/J	MGP_LPJ_G0037838	snRNA gene	Chr5:60388659-60388766 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037747	snRNA gene	Chr5:66808897-66809004 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038603	snRNA gene	Chr5:59211018-59211125 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0037006	snRNA gene	Chr5:59383598-59383705 (-)

Homology

• Gene Tree
  Gm23331
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  13 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm23331
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000088048 (Evidence)
• NCBI Gene
  115490255

Representative Sequences			Length	Strain/Species
genomic	115490255	NCBI Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	XR_004942806	RefSeq | MGI Sequence Detail	108	C57BL/6J

References

• Summaries
  All 16

  Phenotypes 13
• Earliest
  J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
• Latest
  J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707