Gm23337 Gene Detail

Summary

• Symbol
  Gm23337
• Name
  predicted gene, 23337

• Feature Type
  snRNA gene
• IDs
  MGI:5453114
  NCBI Gene: 115489791
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:45933023-45933130 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453114	snRNA gene	Chr3:45933013-45933130 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037797	snRNA gene	Chr3:44192521-44192638 (+)
A/J	MGP_AJ_G0037785	snRNA gene	Chr3:43000466-43000583 (+)
AKR/J	MGP_AKRJ_G0037723	snRNA gene	Chr3:43854270-43854387 (+)
BALB/cJ	MGP_BALBcJ_G0037766	snRNA gene	Chr3:42849642-42849759 (+)
C3H/HeJ	MGP_C3HHeJ_G0037441	snRNA gene	Chr3:44015960-44016077 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038294	snRNA gene	Chr3:46037868-46037985 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035198	snRNA gene	Chr3:40087806-40087923 (+)
CAST/EiJ	MGP_CASTEiJ_G0036604	snRNA gene	Chr3:43952483-43952600 (+)
CBA/J	MGP_CBAJ_G0037415	snRNA gene	Chr3:47341936-47342053 (+)
DBA/2J	MGP_DBA2J_G0037596	snRNA gene	Chr3:42644854-42644971 (+)
FVB/NJ	MGP_FVBNJ_G0037545	snRNA gene	Chr3:41764037-41764154 (+)
LP/J	MGP_LPJ_G0037648	snRNA gene	Chr3:44929087-44929204 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037558	snRNA gene	Chr3:50770081-50770198 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038405	snRNA gene	Chr3:43748548-43748665 (+)
PWK/PhJ	MGP_PWKPhJ_G0036299	snRNA gene	Chr3:42162518-42162635 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036079	snRNA gene	Chr3:43374419-43374536 (+)
WSB/EiJ	MGP_WSBEiJ_G0036818	snRNA gene	Chr3:43785307-43785424 (+)

Homology

• Gene Tree
  Gm23337
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089584 (Evidence)
• NCBI Gene
  115489791

Representative Sequences			Length	Strain/Species
genomic	115489791	NCBI Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	XR_004941675	RefSeq | MGI Sequence Detail	108	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;