Gm23344 Gene Detail

Summary

• Symbol
  Gm23344
• Name
  predicted gene, 23344

• Feature Type
  snoRNA gene
• IDs
  MGI:5453121
  NCBI Gene: 115487262
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:64082330-64082397 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453121	snoRNA gene	Chr9:64082330-64082397 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039526	snoRNA gene	Chr9:63820818-63820885 (+)
A/J	MGP_AJ_G0039528	snoRNA gene	Chr9:61692363-61692430 (+)
AKR/J	MGP_AKRJ_G0039451	snoRNA gene	Chr9:63120711-63120778 (+)
BALB/cJ	MGP_BALBcJ_G0039506	snoRNA gene	Chr9:61415442-61415509 (+)
C3H/HeJ	MGP_C3HHeJ_G0039166	snoRNA gene	Chr9:63653393-63653460 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040057	snoRNA gene	Chr9:65553453-65553520 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036705	snoRNA gene	Chr9:61345406-61345473 (+)
CAST/EiJ	MGP_CASTEiJ_G0038294	snoRNA gene	Chr9:63813056-63813123 (+)
CBA/J	MGP_CBAJ_G0039133	snoRNA gene	Chr9:67816819-67816886 (+)
DBA/2J	MGP_DBA2J_G0039324	snoRNA gene	Chr9:61473631-61473698 (+)
FVB/NJ	MGP_FVBNJ_G0039281	snoRNA gene	Chr9:60776069-60776136 (+)
LP/J	MGP_LPJ_G0039367	snoRNA gene	Chr9:64110308-64110375 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039284	snoRNA gene	Chr9:69116490-69116557 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040155	snoRNA gene	Chr9:63232960-63233027 (+)
PWK/PhJ	MGP_PWKPhJ_G0037968	snoRNA gene	Chr9:61628602-61628669 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037721	snoRNA gene	Chr9:63501143-63501210 (+)
WSB/EiJ	MGP_WSBEiJ_G0038519	snoRNA gene	Chr9:63131499-63131566 (+)

Homology

• Gene Tree
  Gm23344
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000065752 (Evidence)
• NCBI Gene
  115487262

Representative Sequences			Length	Strain/Species
genomic	115487262	NCBI Gene Model | MGI Sequence Detail	68	C57BL/6J
transcript	XR_004935894	RefSeq | MGI Sequence Detail	68	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm23344:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr85597	Chr9:64082194-64082254 (+)	-106 bp