Gm23382 Gene Detail

Summary

• Symbol
  Gm23382
• Name
  predicted gene, 23382

• Feature Type
  snoRNA gene
  BioType Conflict
  
• IDs
  MGI:5453159
  NCBI Gene: 115486241
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:118021275-118021378 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453159	snoRNA gene	Chr4:118021275-118021382 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039216	snoRNA gene	Chr4:119190778-119190881 (+)
A/J	MGP_AJ_G0039212	snoRNA gene	Chr4:114590403-114590506 (+)
AKR/J	MGP_AKRJ_G0039142	snoRNA gene	Chr4:117097528-117097631 (+)
BALB/cJ	MGP_BALBcJ_G0039195	snoRNA gene	Chr4:115224686-115224789 (+)
C3H/HeJ	MGP_C3HHeJ_G0038856	snoRNA gene	Chr4:118667706-118667809 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039743	snoRNA gene	Chr4:123770377-123770480 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036441	snoRNA gene	Chr4:108613759-108613862 (+)
CAST/EiJ	MGP_CASTEiJ_G0037989	snoRNA gene	Chr4:115915335-115915438 (+)
CBA/J	MGP_CBAJ_G0038827	snoRNA gene	Chr4:127152333-127152436 (+)
DBA/2J	MGP_DBA2J_G0039012	snoRNA gene	Chr4:115200888-115200991 (+)
FVB/NJ	MGP_FVBNJ_G0038967	snoRNA gene	Chr4:113718597-113718700 (+)
LP/J	MGP_LPJ_G0039056	snoRNA gene	Chr4:119376313-119376416 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038968	snoRNA gene	Chr4:132066215-132066318 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039842	snoRNA gene	Chr4:118255947-118256050 (+)
PWK/PhJ	MGP_PWKPhJ_G0037675	snoRNA gene	Chr4:112030141-112030244 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037424	snoRNA gene	Chr4:114557907-114558008 (+)
WSB/EiJ	MGP_WSBEiJ_G0038218	snoRNA gene	Chr4:118131777-118131880 (+)

Homology

• Gene Tree
  Gm23382
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm23382
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000088303 (Evidence)
• NCBI Gene
  115486241

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000088303	Ensembl Gene Model | MGI Sequence Detail	104	C57BL/6J
transcript	ENSMUST00000157678	Ensembl | MGI Sequence Detail	104	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12