Gm23441 Gene Detail

Summary

• Symbol
  Gm23441
• Name
  predicted gene, 23441

• Feature Type
  snRNA gene
• IDs
  MGI:5453218
  NCBI Gene: 115489850
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:17857785-17857911 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453218	snRNA gene	Chr3:17857785-17857911 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037787	snRNA gene	Chr3:14992100-14992226 (-)
A/J	MGP_AJ_G0037775	snRNA gene	Chr3:14915051-14915177 (-)
AKR/J	MGP_AKRJ_G0037713	snRNA gene	Chr3:15011640-15011766 (-)
BALB/cJ	MGP_BALBcJ_G0037757	snRNA gene	Chr3:14681129-14681255 (-)
C3H/HeJ	MGP_C3HHeJ_G0037431	snRNA gene	Chr3:15080892-15081018 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038285	snRNA gene	Chr3:15974315-15974441 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035189	snRNA gene	Chr3:13156499-13156625 (-)
CAST/EiJ	MGP_CASTEiJ_G0036594	snRNA gene	Chr3:15039956-15040082 (-)
CBA/J	MGP_CBAJ_G0037405	snRNA gene	Chr3:16263087-16263213 (-)
DBA/2J	MGP_DBA2J_G0037587	snRNA gene	Chr3:14512145-14512271 (-)
FVB/NJ	MGP_FVBNJ_G0037535	snRNA gene	Chr3:14209674-14209800 (-)
LP/J	MGP_LPJ_G0037639	snRNA gene	Chr3:15597105-15597231 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037548	snRNA gene	Chr3:18268621-18268747 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038395	snRNA gene	Chr3:14790081-14790207 (-)
PWK/PhJ	MGP_PWKPhJ_G0036290	snRNA gene	Chr3:14275618-14275744 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036069	snRNA gene	Chr3:14623830-14623950 (-)
WSB/EiJ	MGP_WSBEiJ_G0036809	snRNA gene	Chr3:14854388-14854514 (-)

Homology

• Gene Tree
  Gm23441
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000087893 (Evidence)
• NCBI Gene
  115489850

Representative Sequences			Length	Strain/Species
genomic	115489850	NCBI Gene Model | MGI Sequence Detail	127	C57BL/6J
transcript	XR_004941759	RefSeq | MGI Sequence Detail	127	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;