Gm23505 Gene Detail

Summary

• Symbol
  Gm23505
• Name
  predicted gene, 23505

• Feature Type
  snoRNA gene
• IDs
  MGI:5453282
  NCBI Gene: 115489631
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:51383665-51383794 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453282	snoRNA gene	Chr2:51383665-51383805 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0036827	snoRNA gene	Chr2:50773357-50773486 (-)
A/J	MGP_AJ_G0036815	snoRNA gene	Chr2:48823366-48823495 (-)
AKR/J	MGP_AKRJ_G0036764	snoRNA gene	Chr2:50218625-50218754 (-)
BALB/cJ	MGP_BALBcJ_G0036806	snoRNA gene	Chr2:48916786-48916915 (-)
C3H/HeJ	MGP_C3HHeJ_G0036492	snoRNA gene	Chr2:50203094-50203223 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037320	snoRNA gene	Chr2:52266700-52266829 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034381	snoRNA gene	Chr2:46823243-46823372 (-)
CAST/EiJ	MGP_CASTEiJ_G0035681	snoRNA gene	Chr2:50308633-50308762 (-)
CBA/J	MGP_CBAJ_G0036467	snoRNA gene	Chr2:54218328-54218457 (-)
DBA/2J	MGP_DBA2J_G0036643	snoRNA gene	Chr2:48469639-48469768 (-)
FVB/NJ	MGP_FVBNJ_G0036596	snoRNA gene	Chr2:48167458-48167587 (-)
LP/J	MGP_LPJ_G0036690	snoRNA gene	Chr2:50672291-50672420 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036601	snoRNA gene	Chr2:55311043-55311172 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037435	snoRNA gene	Chr2:50114790-50114919 (-)
PWK/PhJ	MGP_PWKPhJ_G0035375	snoRNA gene	Chr2:48337488-48337617 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035189	snoRNA gene	Chr2:50316914-50317043 (-)
WSB/EiJ	MGP_WSBEiJ_G0035884	snoRNA gene	Chr2:50406778-50406905 (-)

Homology

• Gene Tree
  Gm23505
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089614 (Evidence)
• NCBI Gene
  115489631

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089614	Ensembl Gene Model | MGI Sequence Detail	130	C57BL/6J
transcript	ENSMUST00000158989	Ensembl | MGI Sequence Detail	130	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;