Gm23557 Gene Detail

Summary

• Symbol
  Gm23557
• Name
  predicted gene, 23557

• Feature Type
  snoRNA gene
• IDs
  MGI:5453334
  NCBI Gene: 115489217
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:92617337-92617474 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  72 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453334	snoRNA gene	ChrX:92617337-92617474 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0036852	snoRNA gene	ChrX:89936064-89936201 (-)
A/J	MGP_AJ_G0036840	snoRNA gene	ChrX:90044605-90044742 (-)
AKR/J	MGP_AKRJ_G0036789	snoRNA gene	ChrX:92416767-92416904 (-)
BALB/cJ	MGP_BALBcJ_G0036831	snoRNA gene	ChrX:88741977-88742114 (-)
C3H/HeJ	MGP_C3HHeJ_G0036516	snoRNA gene	ChrX:90306850-90306987 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037344	snoRNA gene	ChrX:92695683-92695820 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034407	snoRNA gene	ChrX:88217179-88217315 (-)
CAST/EiJ	MGP_CASTEiJ_G0035706	snoRNA gene	ChrX:74977723-74977857 (-)
CBA/J	MGP_CBAJ_G0036492	snoRNA gene	ChrX:95380790-95380927 (-)
DBA/2J	MGP_DBA2J_G0036668	snoRNA gene	ChrX:89295027-89295164 (-)
FVB/NJ	MGP_FVBNJ_G0036620	snoRNA gene	ChrX:88682735-88682872 (-)
LP/J	MGP_LPJ_G0036715	snoRNA gene	ChrX:90728064-90728201 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036626	snoRNA gene	ChrX:99662424-99662561 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037460	snoRNA gene	ChrX:89655005-89655142 (-)
PWK/PhJ	MGP_PWKPhJ_G0035399	snoRNA gene	ChrX:72779443-72779578 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035211	snoRNA gene	Chr7:30251676-30251808 (-)
WSB/EiJ	MGP_WSBEiJ_G0035908	snoRNA gene	ChrX:88450660-88450798 (-)

Homology

• Gene Tree
  Gm23557
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088445 (Evidence)
• NCBI Gene
  115489217

Representative Sequences			Length	Strain/Species
genomic	115489217	NCBI Gene Model | MGI Sequence Detail	138	C57BL/6J
transcript	XR_004940522	RefSeq | MGI Sequence Detail	138	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;