Gm23716 Gene Detail

Summary

• Symbol
  Gm23716
• Name
  predicted gene, 23716

• Feature Type
  snoRNA gene
• IDs
  MGI:5453493
  NCBI Gene: 115489613
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:85250481-85250624 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453493	snoRNA gene	Chr2:85250481-85250624 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039018	snoRNA gene	Chr2:86184645-86184788 (+)
A/J	MGP_AJ_G0039013	snoRNA gene	Chr2:82791087-82791230 (+)
AKR/J	MGP_AKRJ_G0038948	snoRNA gene	Chr2:84976146-84976289 (+)
BALB/cJ	MGP_BALBcJ_G0038996	snoRNA gene	Chr2:82929556-82929699 (+)
C3H/HeJ	MGP_C3HHeJ_G0038660	snoRNA gene	Chr2:85197009-85197152 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039546	snoRNA gene	Chr2:88849305-88849448 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036263	snoRNA gene	Chr2:79608176-79608319 (+)
CAST/EiJ	MGP_CASTEiJ_G0037800	snoRNA gene	Chr2:85762437-85762580 (+)
CBA/J	MGP_CBAJ_G0038631	snoRNA gene	Chr2:91977804-91977947 (+)
DBA/2J	MGP_DBA2J_G0038820	snoRNA gene	Chr2:82333877-82334020 (+)
FVB/NJ	MGP_FVBNJ_G0038772	snoRNA gene	Chr2:81601619-81601762 (+)
LP/J	MGP_LPJ_G0038859	snoRNA gene	Chr2:85955762-85955905 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038772	snoRNA gene	Chr2:94310749-94310892 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039646	snoRNA gene	Chr2:85200760-85200903 (+)
PWK/PhJ	MGP_PWKPhJ_G0037484	snoRNA gene	Chr2:82266583-82266726 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037238	snoRNA gene	Chr2:85334631-85334774 (+)
WSB/EiJ	MGP_WSBEiJ_G0038028	snoRNA gene	Chr2:85886185-85886328 (+)

Homology

• Gene Tree
  Gm23716
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Targeted
  2
• Genomic Mutations
  2 involving Gm23716
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000087973 (Evidence)
• NCBI Gene
  115489613

Representative Sequences			Length	Strain/Species
genomic	115489613	NCBI Gene Model | MGI Sequence Detail	144	C57BL/6J
transcript	XR_004941189	RefSeq | MGI Sequence Detail	144	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
• Latest
  J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5:e16087