Gm23796 Gene Detail

Summary

• Symbol
  Gm23796
• Name
  predicted gene, 23796

• Feature Type
  snRNA gene
• IDs
  MGI:5453573
  NCBI Gene: 115489849
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:39720437-39720595 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  186 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453573	snRNA gene	Chr3:39720437-39720596 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037793	snRNA gene	Chr3:37601025-37601184 (+)
A/J	MGP_AJ_G0037781	snRNA gene	Chr3:36801270-36801429 (+)
AKR/J	MGP_AKRJ_G0037719	snRNA gene	Chr3:37489925-37490084 (+)
BALB/cJ	MGP_BALBcJ_G0037763	snRNA gene	Chr3:36556501-36556660 (+)
C3H/HeJ	MGP_C3HHeJ_G0037437	snRNA gene	Chr3:37561498-37561657 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038291	snRNA gene	Chr3:39265635-39265794 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035194	snRNA gene	Chr3:34394195-34394354 (+)
CAST/EiJ	MGP_CASTEiJ_G0036600	snRNA gene	Chr3:37474757-37474916 (+)
CBA/J	MGP_CBAJ_G0037411	snRNA gene	Chr3:40389577-40389736 (+)
DBA/2J	MGP_DBA2J_G0037593	snRNA gene	Chr3:36264137-36264296 (+)
FVB/NJ	MGP_FVBNJ_G0037541	snRNA gene	Chr3:35652450-35652609 (+)
LP/J	MGP_LPJ_G0037645	snRNA gene	Chr3:38415284-38415443 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037554	snRNA gene	Chr3:42841141-42841300 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038401	snRNA gene	Chr3:37368261-37368420 (+)
PWK/PhJ	MGP_PWKPhJ_G0036296	snRNA gene	Chr3:35927162-35927321 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036075	snRNA gene	Chr3:36724531-36724710 (+)
WSB/EiJ	MGP_WSBEiJ_G0036815	snRNA gene	Chr3:37365264-37365423 (+)

Homology

• Gene Tree
  Gm23796
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000065945 (Evidence)
• NCBI Gene
  115489849

Representative Sequences			Length	Strain/Species
genomic	115489849	NCBI Gene Model | MGI Sequence Detail	159	C57BL/6J
transcript	XR_004941758	RefSeq | MGI Sequence Detail	159	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;