Gm23848 Gene Detail

Summary

• Symbol
  Gm23848
• Name
  predicted gene, 23848

• Feature Type
  snRNA gene
• IDs
  MGI:5453625
  NCBI Gene: 115488598
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:49401591-49401696 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  202 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453625	snRNA gene	Chr15:49401591-49401696 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037519	snRNA gene	Chr15:48384851-48384956 (+)
A/J	MGP_AJ_G0037514	snRNA gene	Chr15:46461672-46461777 (+)
AKR/J	MGP_AKRJ_G0037454	snRNA gene	Chr15:47740690-47740795 (+)
BALB/cJ	MGP_BALBcJ_G0037500	snRNA gene	Chr15:46654860-46654965 (+)
C3H/HeJ	MGP_C3HHeJ_G0037179	snRNA gene	Chr15:47849052-47849157 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038019	snRNA gene	Chr15:50257241-50257346 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034982	snRNA gene	Chr15:43641294-43641399 (+)
CAST/EiJ	MGP_CASTEiJ_G0036350	snRNA gene	Chr15:48352120-48352225 (+)
CBA/J	MGP_CBAJ_G0037151	snRNA gene	Chr15:52012305-52012410 (+)
DBA/2J	MGP_DBA2J_G0037329	snRNA gene	Chr15:46299930-46300035 (+)
FVB/NJ	MGP_FVBNJ_G0037274	snRNA gene	Chr15:45562100-45562205 (+)
LP/J	MGP_LPJ_G0037378	snRNA gene	Chr15:48106089-48106194 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037289	snRNA gene	Chr15:56771866-56771971 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038133	snRNA gene	Chr15:48084484-48084589 (+)
PWK/PhJ	MGP_PWKPhJ_G0036042	snRNA gene	Chr15:46399689-46399794 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035833	snRNA gene	Chr15:47798710-47798815 (+)
WSB/EiJ	MGP_WSBEiJ_G0036562	snRNA gene	Chr15:48010771-48010876 (+)

Homology

• Gene Tree
  Gm23848
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000065760 (Evidence)
• NCBI Gene
  115488598

Representative Sequences			Length	Strain/Species
genomic	115488598	NCBI Gene Model | MGI Sequence Detail	106	C57BL/6J
transcript	XR_004939131	RefSeq | MGI Sequence Detail	106	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;