Gm23902 Gene Detail

Summary

• Symbol
  Gm23902
• Name
  predicted gene, 23902

• Feature Type
  snoRNA gene
• IDs
  MGI:5453679
  NCBI Gene: 115485767
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:128417777-128417910 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  73 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453679	snoRNA gene	Chr1:128417777-128417910 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038437	snoRNA gene	Chr1:131754728-131754861 (+)
A/J	MGP_AJ_G0038427	snoRNA gene	Chr1:126826774-126826907 (+)
AKR/J	MGP_AKRJ_G0038365	snoRNA gene	Chr1:130579927-130580060 (+)
BALB/cJ	MGP_BALBcJ_G0038414	snoRNA gene	Chr1:127207638-127207771 (+)
C3H/HeJ	MGP_C3HHeJ_G0038077	snoRNA gene	Chr1:130742701-130742834 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038952	snoRNA gene	Chr1:136685141-136685274 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035734	snoRNA gene	Chr1:120169789-120169922 (+)
CAST/EiJ	MGP_CASTEiJ_G0037223	snoRNA gene	Chr1:129727378-129727511 (+)
CBA/J	MGP_CBAJ_G0038049	snoRNA gene	Chr1:141297210-141297343 (+)
DBA/2J	MGP_DBA2J_G0038240	snoRNA gene	Chr1:125870457-125870590 (+)
FVB/NJ	MGP_FVBNJ_G0038190	snoRNA gene	Chr1:124577237-124577370 (+)
LP/J	MGP_LPJ_G0038279	snoRNA gene	Chr1:133090308-133090441 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038189	snoRNA gene	Chr1:147132206-147132339 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039061	snoRNA gene	Chr1:130368992-130369125 (+)
PWK/PhJ	MGP_PWKPhJ_G0036908	snoRNA gene	Chr1:124846704-124846837 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036664	snoRNA gene	Chr1:129309303-129309436 (+)
WSB/EiJ	MGP_WSBEiJ_G0037453	snoRNA gene	Chr1:130322680-130322813 (+)

Homology

• Gene Tree
  Gm23902
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088196 (Evidence)
• NCBI Gene
  115485767

Representative Sequences			Length	Strain/Species
genomic	115485767	NCBI Gene Model | MGI Sequence Detail	134	C57BL/6J
transcript	XR_004936754	RefSeq | MGI Sequence Detail	134	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;