Gm23904 Gene Detail

Summary

• Symbol
  Gm23904
• Name
  predicted gene, 23904

• Feature Type
  snoRNA gene
  BioType Conflict
  
• IDs
  MGI:5453681
  NCBI Gene: 115485662
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:86960483-86960606 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453681	snoRNA gene	Chr8:86960483-86960606 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0039472	snoRNA gene	Chr8:83769109-83769232 (+)
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0039109	snoRNA gene	Chr8:86863821-86863944 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039998	snoRNA gene	Chr8:90553024-90553147 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038241	snoRNA gene	Chr8:86278833-86278956 (+)
CBA/J	MGP_CBAJ_G0039078	snoRNA gene	Chr8:93619957-93620080 (+)
DBA/2J	MGP_DBA2J_G0039267	snoRNA gene	Chr8:83395951-83396074 (+)
FVB/NJ	MGP_FVBNJ_G0039223	snoRNA gene	Chr8:82340046-82340169 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0039227	snoRNA gene	Chr8:96162458-96162581 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040099	snoRNA gene	Chr8:86240539-86240662 (+)
PWK/PhJ	MGP_PWKPhJ_G0037913	snoRNA gene	Chr8:82635244-82635367 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037668	snoRNA gene	Chr8:85003403-85003526 (+)
WSB/EiJ	MGP_WSBEiJ_G0038464	snoRNA gene	Chr8:86676623-86676746 (+)

Homology

• Gene Tree
  Gm23904
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16

• Ensembl
  ENSMUSG00000088192 (Evidence)
• NCBI Gene
  115485662

Representative Sequences			Length	Strain/Species
genomic	115485662	NCBI Gene Model | MGI Sequence Detail	124	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;