Gm23958 Gene Detail

Summary

• Symbol
  Gm23958
• Name
  predicted gene, 23958

• Feature Type
  snRNA gene
• IDs
  MGI:5453735
  NCBI Gene: 115489191
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:137323464-137323566 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453735	snRNA gene	ChrX:137323464-137323568 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038351	snRNA gene	ChrX:135870486-135870590 (-)
A/J	MGP_AJ_G0038344	snRNA gene	ChrX:135258005-135258109 (-)
AKR/J	MGP_AKRJ_G0038283	snRNA gene	ChrX:139606211-139606315 (-)
BALB/cJ	MGP_BALBcJ_G0038328	snRNA gene	ChrX:133642520-133642624 (-)
C3H/HeJ	MGP_C3HHeJ_G0037994	snRNA gene	ChrX:135900109-135900213 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038865	snRNA gene	ChrX:139890928-139891032 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0037138	snRNA gene	ChrX:116677545-116677649 (-)
CBA/J	MGP_CBAJ_G0037963	snRNA gene	ChrX:144145117-144145221 (-)
DBA/2J	MGP_DBA2J_G0038157	snRNA gene	ChrX:134490665-134490769 (-)
FVB/NJ	MGP_FVBNJ_G0038104	snRNA gene	ChrX:133720288-133720392 (-)
LP/J	MGP_LPJ_G0038196	snRNA gene	ChrX:136852734-136852838 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038102	snRNA gene	ChrX:151529594-151529698 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038972	snRNA gene	ChrX:135213116-135213220 (-)
PWK/PhJ	MGP_PWKPhJ_G0036829	snRNA gene	ChrX:113684085-113684189 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036589	snRNA gene	ChrX:117272040-117272145 (-)
WSB/EiJ	MGP_WSBEiJ_G0037368	snRNA gene	ChrX:133543080-133543184 (-)

Homology

• Gene Tree
  Gm23958
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000087832 (Evidence)
• NCBI Gene
  115489191

Representative Sequences			Length	Strain/Species
genomic	115489191	NCBI Gene Model | MGI Sequence Detail	103	C57BL/6J
transcript	XR_004940496	RefSeq | MGI Sequence Detail	103	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;