Gm23996 Gene Detail

Summary

• Symbol
  Gm23996
• Name
  predicted gene, 23996

• Feature Type
  snoRNA gene
• IDs
  MGI:5453773
  NCBI Gene: 115485732
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:127788914-127789044 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453773	snoRNA gene	Chr10:127788914-127789044 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038531	snoRNA gene	Chr10:131613284-131613414 (-)
A/J	MGP_AJ_G0038521	snoRNA gene	Chr10:126353133-126353263 (-)
AKR/J	MGP_AKRJ_G0038459	snoRNA gene	Chr10:130071373-130071503 (-)
BALB/cJ	MGP_BALBcJ_G0038508	snoRNA gene	Chr10:126741232-126741362 (-)
C3H/HeJ	MGP_C3HHeJ_G0038171	snoRNA gene	Chr10:130207659-130207789 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039046	snoRNA gene	Chr10:136076928-136077058 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035824	snoRNA gene	Chr10:120309161-120309291 (-)
CAST/EiJ	MGP_CASTEiJ_G0037315	snoRNA gene	Chr10:130930361-130930491 (-)
CBA/J	MGP_CBAJ_G0038143	snoRNA gene	Chr10:141601858-141601988 (-)
DBA/2J	MGP_DBA2J_G0038333	snoRNA gene	Chr10:125426142-125426272 (-)
FVB/NJ	MGP_FVBNJ_G0038284	snoRNA gene	Chr10:124363321-124363451 (-)
LP/J	MGP_LPJ_G0038373	snoRNA gene	Chr10:132229069-132229199 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038283	snoRNA gene	Chr10:144214899-144215029 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039155	snoRNA gene	Chr10:130163224-130163354 (-)
PWK/PhJ	MGP_PWKPhJ_G0037001	snoRNA gene	Chr10:125656809-125656939 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036757	snoRNA gene	Chr10:129249759-129249889 (-)
WSB/EiJ	MGP_WSBEiJ_G0037546	snoRNA gene	Chr10:130384470-130384600 (-)

Homology

• Gene Tree
  Gm23996
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088687 (Evidence)
• NCBI Gene
  115485732

Representative Sequences			Length	Strain/Species
genomic	115485732	NCBI Gene Model | MGI Sequence Detail	131	C57BL/6J
transcript	XR_004936569	RefSeq | MGI Sequence Detail	131	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;