Gm24042 Gene Detail

Summary

• Symbol
  Gm24042
• Name
  predicted gene, 24042

• Feature Type
  snRNA gene
• IDs
  MGI:5453819
  NCBI Gene: 115490006
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:25819671-25819773 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  160 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453819	snRNA gene	Chr4:25819671-25819775 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037880	snRNA gene	Chr4:22941566-22941668 (-)
A/J	MGP_AJ_G0037865	snRNA gene	Chr4:22263306-22263408 (-)
AKR/J	MGP_AKRJ_G0037807	snRNA gene	Chr4:22769500-22769602 (-)
BALB/cJ	MGP_BALBcJ_G0037851	snRNA gene	Chr4:22347688-22347790 (-)
C3H/HeJ	MGP_C3HHeJ_G0037526	snRNA gene	Chr4:22965276-22965378 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038380	snRNA gene	Chr4:23957989-23958091 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0037499	snRNA gene	Chr4:24586950-24587052 (-)
DBA/2J	MGP_DBA2J_G0037682	snRNA gene	Chr4:22192840-22192942 (-)
FVB/NJ	MGP_FVBNJ_G0037629	snRNA gene	Chr4:21785932-21786034 (-)
LP/J	MGP_LPJ_G0037730	snRNA gene	Chr4:23065697-23065799 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0038492	snRNA gene	Chr4:22730401-22730503 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm24042
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000065048 (Evidence)
• NCBI Gene
  115490006

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000065048	Ensembl Gene Model | MGI Sequence Detail	103	C57BL/6J
transcript	ENSMUST00000083114	Ensembl | MGI Sequence Detail	103	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;