Gm24143 Gene Detail

Summary

• Symbol
  Gm24143
• Name
  predicted gene, 24143

• Feature Type
  snoRNA gene
• IDs
  MGI:5453920
  NCBI Gene: 115487889
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:72506832-72506976 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  44 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453920	snoRNA gene	Chr11:72506832-72506976 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038582	snoRNA gene	Chr11:73253923-73257097 (-)
A/J	MGP_AJ_G0038573	snoRNA gene	Chr11:70517127-70517264 (-)
AKR/J	MGP_AKRJ_G0038509	snoRNA gene	Chr11:72663223-72663360 (-)
BALB/cJ	MGP_BALBcJ_G0038559	snoRNA gene	Chr11:70814050-70814198 (-)
C3H/HeJ	MGP_C3HHeJ_G0038221	snoRNA gene	Chr11:72626022-72626763 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039098	snoRNA gene	Chr11:75468237-75468385 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035872	snoRNA gene	Chr11:67342425-67342553 (-)
CAST/EiJ	MGP_CASTEiJ_G0037367	snoRNA gene	Chr11:72987824-72989400 (-)
CBA/J	MGP_CBAJ_G0038193	snoRNA gene	Chr11:78835515-78835660 (-)
DBA/2J	MGP_DBA2J_G0038383	snoRNA gene	Chr11:70144761-70144898 (-)
FVB/NJ	MGP_FVBNJ_G0038334	snoRNA gene	Chr11:69692375-69692512 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0038334	snoRNA gene	Chr11:79363503-79363648 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039206	snoRNA gene	Chr11:72848895-72850406 (-)
PWK/PhJ	MGP_PWKPhJ_G0037052	snoRNA gene	Chr11:70773602-70773758 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036807	snoRNA gene	Chr11:72574952-72575088 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm24143
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm24143
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000064567 (Evidence)
• NCBI Gene
  115487889

Representative Sequences			Length	Strain/Species
genomic	115487889	NCBI Gene Model | MGI Sequence Detail	145	C57BL/6J
transcript	XR_004937338	RefSeq | MGI Sequence Detail	145	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52