Gm24147 Gene Detail

Summary

• Symbol
  Gm24147
• Name
  predicted gene, 24147

• Feature Type
  snoRNA gene
• IDs
  MGI:5453924
  NCBI Gene: 115489212
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:36848886-36849029 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  32 from dbSNP Build 142
• Strain Annotations
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453924	snoRNA gene	ChrX:36848886-36849029 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	MGP_AKRJ_G0039500	snoRNA gene	ChrX:33447919-33448061 (-)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0035867	snoRNA gene	Chr11:64403287-64403429 (-)
CAST/EiJ	MGP_CASTEiJ_G0037361	snoRNA gene	Chr11:69764589-69764731 (-)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0039376	snoRNA gene	ChrX:32523020-32523162 (-)
FVB/NJ	MGP_FVBNJ_G0039330	snoRNA gene	ChrX:32266314-32266439 (-)
LP/J	MGP_LPJ_G0039415	snoRNA gene	ChrX:32868770-32868912 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0037047	snoRNA gene	Chr11:67715268-67715410 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0038567	snoRNA gene	ChrX:32235607-32235750 (+)

Homology

• Gene Tree
  Gm24147
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm24147
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13
• RefSeq
  1

• Ensembl
  ENSMUSG00000064697 (Evidence)
• NCBI Gene
  115489212

Representative Sequences			Length	Strain/Species
genomic	115489212	NCBI Gene Model | MGI Sequence Detail	144	C57BL/6J
transcript	XR_004940518	RefSeq | MGI Sequence Detail	144	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:229199 Song HW, et al., shRNA off-target effects in vivo: impaired endogenous siRNA expression and spermatogenic defects. PLoS One. 2015;10(3):e0118549
• Latest
  J:306454 Tan K, et al., The Rhox gene cluster suppresses germline LINE1 transposition. Proc Natl Acad Sci U S A. 2021 Jun 8;118(23):e2024785118