Gm24235 Gene Detail

Summary

• Symbol
  Gm24235
• Name
  predicted gene, 24235

• Feature Type
  snoRNA gene
• IDs
  MGI:5454012
  NCBI Gene: 115486309
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:54984557-54984685 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454012	snoRNA gene	Chr5:54984557-54984685 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039251	snoRNA gene	Chr5:53950492-53950620 (+)
A/J	MGP_AJ_G0039246	snoRNA gene	Chr5:52019642-52019770 (+)
AKR/J	MGP_AKRJ_G0039175	snoRNA gene	Chr5:53792621-53792749 (+)
BALB/cJ	MGP_BALBcJ_G0039229	snoRNA gene	Chr5:52523458-52523586 (+)
C3H/HeJ	MGP_C3HHeJ_G0038889	snoRNA gene	Chr5:53975269-53975397 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039777	snoRNA gene	Chr5:56133400-56133528 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036474	snoRNA gene	Chr5:48720810-48720941 (+)
CAST/EiJ	MGP_CASTEiJ_G0038024	snoRNA gene	Chr5:52957679-52957807 (+)
CBA/J	MGP_CBAJ_G0038860	snoRNA gene	Chr5:57908406-57908534 (+)
DBA/2J	MGP_DBA2J_G0039045	snoRNA gene	Chr5:52074362-52074490 (+)
FVB/NJ	MGP_FVBNJ_G0039001	snoRNA gene	Chr5:51396008-51396136 (+)
LP/J	MGP_LPJ_G0039090	snoRNA gene	Chr5:54395640-54395768 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039002	snoRNA gene	Chr5:58923667-58923795 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039875	snoRNA gene	Chr5:53309818-53309946 (+)
PWK/PhJ	MGP_PWKPhJ_G0037709	snoRNA gene	Chr5:51146819-51146947 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037458	snoRNA gene	Chr5:52808967-52809096 (+)
WSB/EiJ	MGP_WSBEiJ_G0038251	snoRNA gene	Chr5:53366677-53366805 (+)

Homology

• Gene Tree
  Gm24235
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  13 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm24235
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000077507 (Evidence)
• NCBI Gene
  115486309

Representative Sequences			Length	Strain/Species
genomic	115486309	NCBI Gene Model | MGI Sequence Detail	129	C57BL/6J
transcript	XR_004942845	RefSeq | MGI Sequence Detail	129	C57BL/6J

References

• Summaries
  All 16

  Phenotypes 13
• Earliest
  J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
• Latest
  J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707