Gm24435 Gene Detail

Summary

• Symbol
  Gm24435
• Name
  predicted gene, 24435

• Feature Type
  snRNA gene
• IDs
  MGI:5454212
  NCBI Gene: 115489787
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:97047868-97047972 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454212	snRNA gene	Chr3:97047868-97047977 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037841	snRNA gene	Chr3:98057367-98057476 (-)
A/J	MGP_AJ_G0037827	snRNA gene	Chr3:94932356-94932465 (-)
AKR/J	MGP_AKRJ_G0037767	snRNA gene	Chr3:97200554-97200663 (-)
BALB/cJ	MGP_BALBcJ_G0037811	snRNA gene	Chr3:94741341-94741450 (-)
C3H/HeJ	MGP_C3HHeJ_G0037486	snRNA gene	Chr3:97481217-97481326 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038340	snRNA gene	Chr3:101677184-101677293 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035237	snRNA gene	Chr3:91168974-91169083 (-)
CAST/EiJ	MGP_CASTEiJ_G0036649	snRNA gene	Chr3:96740775-96740884 (-)
CBA/J	MGP_CBAJ_G0037459	snRNA gene	Chr3:105340244-105340353 (-)
DBA/2J	MGP_DBA2J_G0037643	snRNA gene	Chr3:94241916-94242025 (-)
FVB/NJ	MGP_FVBNJ_G0037589	snRNA gene	Chr3:92254715-92254824 (-)
LP/J	MGP_LPJ_G0037692	snRNA gene	Chr3:99334516-99334625 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037602	snRNA gene	Chr3:111425899-111426008 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038452	snRNA gene	Chr3:96789706-96789815 (-)
PWK/PhJ	MGP_PWKPhJ_G0036343	snRNA gene	Chr3:94090084-94090193 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036122	snRNA gene	Chr3:95064497-95064606 (-)
WSB/EiJ	MGP_WSBEiJ_G0036863	snRNA gene	Chr3:97240829-97240938 (-)

Homology

• Gene Tree
  Gm24435
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm24435
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088511 (Evidence)
• NCBI Gene
  115489787

Representative Sequences			Length	Strain/Species
genomic	115489787	NCBI Gene Model | MGI Sequence Detail	105	C57BL/6J
transcript	XR_004941671	RefSeq | MGI Sequence Detail	105	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:147112 Taconic, Information obtained from Taconic website. MGI Direct Data Submission. 2006-2017;