Gm24472 Gene Detail

Summary

• Symbol
  Gm24472
• Name
  predicted gene, 24472

• Feature Type
  snoRNA gene
• IDs
  MGI:5454249
  NCBI Gene: 115486203
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:86974200-86974331 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  151 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454249	snoRNA gene	Chr3:86974200-86974331 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039109	snoRNA gene	Chr3:87142671-87142802 (+)
A/J	MGP_AJ_G0039105	snoRNA gene	Chr3:84178008-84178139 (+)
AKR/J	MGP_AKRJ_G0039036	snoRNA gene	Chr3:86231643-86231774 (+)
BALB/cJ	MGP_BALBcJ_G0039088	snoRNA gene	Chr3:84279473-84279604 (+)
C3H/HeJ	MGP_C3HHeJ_G0038749	snoRNA gene	Chr3:86501995-86502126 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039636	snoRNA gene	Chr3:90366564-90366695 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036347	snoRNA gene	Chr3:79849859-79849990 (+)
CAST/EiJ	MGP_CASTEiJ_G0037886	snoRNA gene	Chr3:86729836-86729960 (+)
CBA/J	MGP_CBAJ_G0038720	snoRNA gene	Chr3:93412453-93412584 (+)
DBA/2J	MGP_DBA2J_G0038906	snoRNA gene	Chr3:83686642-83686773 (+)
FVB/NJ	MGP_FVBNJ_G0038861	snoRNA gene	Chr3:82001653-82001784 (+)
LP/J	MGP_LPJ_G0038950	snoRNA gene	Chr3:88094052-88094183 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038862	snoRNA gene	Chr3:99703475-99703606 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039736	snoRNA gene	Chr3:85993376-85993507 (+)
PWK/PhJ	MGP_PWKPhJ_G0037574	snoRNA gene	Chr3:83491365-83491489 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037324	snoRNA gene	Chr3:85175410-85175534 (+)
WSB/EiJ	MGP_WSBEiJ_G0038113	snoRNA gene	Chr3:86375842-86375973 (+)

Homology

• Gene Tree
  Gm24472
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000077672 (Evidence)
• NCBI Gene
  115486203

Representative Sequences			Length	Strain/Species
genomic	115486203	NCBI Gene Model | MGI Sequence Detail	132	C57BL/6J
transcript	XR_004941739	RefSeq | MGI Sequence Detail	132	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;