Mir3618 Gene Detail

Summary

• Symbol
  Mir3618
• Name
  microRNA 3618
• Synonyms
  Gm24572

• Feature Type
  miRNA gene
• IDs
  MGI:5454349
  NCBI Gene: 104795666
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:18102414-18102501 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454349	miRNA gene	Chr16:18102414-18102501 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0008253	miRNA gene	Chr16:15499954-15500041 (-)
A/J	MGP_AJ_G0008242	miRNA gene	Chr16:14728617-14728704 (-)
AKR/J	MGP_AKRJ_G0008225	miRNA gene	Chr16:15309039-15309126 (-)
BALB/cJ	MGP_BALBcJ_G0008227	miRNA gene	Chr16:14878175-14878262 (-)
C3H/HeJ	MGP_C3HHeJ_G0008169	miRNA gene	Chr16:15471946-15472033 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0008421	miRNA gene	Chr16:15769647-15769734 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007489	miRNA gene	Chr16:14778168-14778255 (-)
CAST/EiJ	MGP_CASTEiJ_G0008040	miRNA gene	Chr16:15360596-15360683 (-)
CBA/J	MGP_CBAJ_G0008138	miRNA gene	Chr16:16465777-16465864 (-)
DBA/2J	MGP_DBA2J_G0008171	miRNA gene	Chr16:14640859-14640946 (-)
FVB/NJ	MGP_FVBNJ_G0008196	miRNA gene	Chr16:14711927-14712014 (-)
LP/J	MGP_LPJ_G0008253	miRNA gene	Chr16:15277810-15277897 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008159	miRNA gene	Chr16:16105532-16105619 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008412	miRNA gene	Chr16:15247443-15247530 (-)
PWK/PhJ	MGP_PWKPhJ_G0007962	miRNA gene	Chr16:14913240-14913327 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0007853	miRNA gene	Chr16:15206097-15206184 (-)
WSB/EiJ	MGP_WSBEiJ_G0008117	miRNA gene	Chr16:15235149-15235236 (-)

Homology

• Human Ortholog
  MIR3618, microRNA 3618

• Vertebrate Orthologs
  1

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  MIR3618, microRNA 3618
  
• Links
  HGNC:38937

  NCBI Gene ID: 100500860

  
  
• Chr Location
  chr22:20085746-20085833 (+)  GRCh38

---

• MGI Vertebrate Homology
  Mir3618 stringent orthology
  1 human;1 mouse
  
• HCOP
  vertebrate homology predictions: MIR3618
• Gene Tree
  Mir3618
  

Human Diseases

• References
  5 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  124 phenotype references
  

• All Mutations and Alleles
  11
• Endonuclease-mediated
  2
• Targeted
  9
• Genomic Mutations
  11 involving Mir3618
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000093246 (Evidence)
• NCBI Gene
  104795666

Representative Sequences			Length	Strain/Species
genomic	104795666	NCBI Gene Model | MGI Sequence Detail	88	C57BL/6J
transcript	NR_128565	RefSeq | MGI Sequence Detail	88	ZRU/MplStud

Other Database
Links

miRBase

MI0030345

Other
Accession IDs

MGI:6690720

References

• Summaries
  All 130

  Diseases 5

  Phenotypes 124
• Earliest
  J:57757 Lindsay EA, et al., Congenital heart disease in mice deficient for the DiGeorge syndrome region [see comments]. Nature. 1999 Sep 23;401(6751):379-83
• Latest
  J:357279 Donovan MG, et al., Multimodal analysis of dysregulated heme metabolism, hypoxic signaling, and stress erythropoiesis in Down syndrome. Cell Rep. 2024 Aug 27;43(8):114599

TSS for Mir3618:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr140239	Chr16:18102815-18102819 (-)	-316 bp