Gm24598 Gene Detail

Summary

• Symbol
  Gm24598
• Name
  predicted gene, 24598

• Feature Type
  snoRNA gene
• IDs
  MGI:5454375
  NCBI Gene: 115489207
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:63540190-63540263 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  59 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454375	snoRNA gene	ChrX:63540190-63540263 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038665	snoRNA gene	Chr12:111880176-111880249 (+)
A/J	MGP_AJ_G0038657	snoRNA gene	Chr12:107569713-107569786 (+)
AKR/J	MGP_AKRJ_G0038592	snoRNA gene	Chr12:110706089-110706162 (+)
BALB/cJ	MGP_BALBcJ_G0039557	snoRNA gene	ChrX:59550030-59550103 (+)
C3H/HeJ	MGP_C3HHeJ_G0038304	snoRNA gene	Chr12:111150363-111150436 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040109	snoRNA gene	ChrX:61821127-61821200 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0037445	snoRNA gene	Chr12:106102771-106109551 (+)
CBA/J	MGP_CBAJ_G0038276	snoRNA gene	Chr12:119833395-119833468 (+)
DBA/2J	MGP_DBA2J_G0038465	snoRNA gene	Chr12:107124731-107124804 (+)
FVB/NJ	MGP_FVBNJ_G0039335	snoRNA gene	ChrX:59272325-59272398 (+)
LP/J	MGP_LPJ_G0039420	snoRNA gene	ChrX:60726314-60726387 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039337	snoRNA gene	ChrX:65326984-65327057 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039290	snoRNA gene	Chr12:110190967-110191040 (+)
PWK/PhJ	MGP_PWKPhJ_G0037131	snoRNA gene	Chr12:101732942-101733207 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0037678	snoRNA gene	Chr12:111102568-111102641 (+)

Homology

• Gene Tree
  Gm24598
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000084459 (Evidence)
• NCBI Gene
  115489207

Representative Sequences			Length	Strain/Species
genomic	115489207	NCBI Gene Model | MGI Sequence Detail	74	C57BL/6J
transcript	XR_004940512	RefSeq | MGI Sequence Detail	74	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;