Gm24837 Gene Detail

Summary

• Symbol
  Gm24837
• Name
  predicted gene, 24837

• Feature Type
  snoRNA gene
• IDs
  MGI:5454614
  NCBI Gene: 115490071
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:41211502-41211582 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  72 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454614	snoRNA gene	Chr4:41211502-41211582 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039171	snoRNA gene	Chr4:39143435-39143515 (-)
A/J	MGP_AJ_G0039167	snoRNA gene	Chr4:37658835-37658915 (-)
AKR/J	MGP_AKRJ_G0039098	snoRNA gene	Chr4:38622116-38622196 (-)
BALB/cJ	MGP_BALBcJ_G0039150	snoRNA gene	Chr4:37990146-37990226 (-)
C3H/HeJ	MGP_C3HHeJ_G0038811	snoRNA gene	Chr4:39168835-39168915 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039698	snoRNA gene	Chr4:40595191-40595271 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036401	snoRNA gene	Chr4:35309089-35309169 (-)
CAST/EiJ	MGP_CASTEiJ_G0037946	snoRNA gene	Chr4:38847439-38847519 (-)
CBA/J	MGP_CBAJ_G0038782	snoRNA gene	Chr4:41986559-41986639 (-)
DBA/2J	MGP_DBA2J_G0038967	snoRNA gene	Chr4:37579215-37579295 (-)
FVB/NJ	MGP_FVBNJ_G0038922	snoRNA gene	Chr4:36912495-36912575 (-)
LP/J	MGP_LPJ_G0039011	snoRNA gene	Chr4:39208469-39208549 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038923	snoRNA gene	Chr4:45294063-45294143 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039797	snoRNA gene	Chr4:38744666-38744746 (-)
PWK/PhJ	MGP_PWKPhJ_G0037634	snoRNA gene	Chr4:37592187-37592267 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037383	snoRNA gene	Chr4:38457345-38457425 (-)
WSB/EiJ	MGP_WSBEiJ_G0038174	snoRNA gene	Chr4:38725192-38725272 (-)

Homology

• Gene Tree
  Gm24837
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089308 (Evidence)
• NCBI Gene
  115490071

Representative Sequences			Length	Strain/Species
genomic	115490071	NCBI Gene Model | MGI Sequence Detail	81	C57BL/6J
transcript	XR_004942393	RefSeq | MGI Sequence Detail	81	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm24837:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr41317	Chr4:41211858-41211900 (-)	-297 bp