Gm24843 Gene Detail

Summary

• Symbol
  Gm24843
• Name
  predicted gene, 24843

• Feature Type
  snoRNA gene
  BioType Conflict
  
• IDs
  MGI:5454620
  NCBI Gene: 115486388
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:124035498-124035573 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  146 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454620	snoRNA gene	Chr6:124035458-124035573 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039351	snoRNA gene	Chr6:127310848-127310923 (-)
A/J	MGP_AJ_G0039348	snoRNA gene	Chr6:122471604-122471679 (-)
AKR/J	MGP_AKRJ_G0039275	snoRNA gene	Chr6:125818612-125818687 (-)
BALB/cJ	MGP_BALBcJ_G0039328	snoRNA gene	Chr6:122082882-122082957 (-)
C3H/HeJ	MGP_C3HHeJ_G0038990	snoRNA gene	Chr6:125872977-125873052 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039877	snoRNA gene	Chr6:130608738-130608813 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038121	snoRNA gene	Chr6:126104502-126104577 (-)
CBA/J	MGP_CBAJ_G0038959	snoRNA gene	Chr6:135754987-135755062 (-)
DBA/2J	MGP_DBA2J_G0039147	snoRNA gene	Chr6:121397138-121397213 (-)
FVB/NJ	MGP_FVBNJ_G0039102	snoRNA gene	Chr6:120319532-120319607 (-)
LP/J	MGP_LPJ_G0039191	snoRNA gene	Chr6:127532593-127532668 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039106	snoRNA gene	Chr6:139656998-139657073 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039976	snoRNA gene	Chr6:125731324-125731399 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0038348	snoRNA gene	Chr6:126073594-126073669 (-)

Homology

• Gene Tree
  Gm24843
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000089307 (Evidence)
• NCBI Gene
  115486388

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089307	Ensembl Gene Model | MGI Sequence Detail	76	C57BL/6J
transcript	ENSMUST00000158682	Ensembl | MGI Sequence Detail	76	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;